WDR73
Integrator complex assembly factor WDR73
Also known as: FLJ14888, HSPC264, WDR73_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q6P4I2
- Gene
- WDR73
- Ensembl
- ENSG00000177082
- Chromosome
- 15
- Canonical length
- 378 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins
OverviewNCBI Gene
The protein encoded by this gene is thought to contain multiple WD40 repeats. WD40 repeats are motifs that contain 40-60 amino acids, and usually end with Trp-Asp (WD). This protein is found in the cytoplasm during interphase, but accumulates at the spindle poles and astral microtubules during mitosis. Reduced expression of this gene results in abnormalities in the size and morphology of the nucleus. Mutations in this gene have been associated with Galloway-Mowat syndrome PMID: 25466283), which is a rare autosomal recessive disorder that affects both the central nervous system and kidneys. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2015]
Canonical amino-acid sequenceUniProt
378 residues, UniProt reviewed canonical sequence.
>Q6P4I2|WDR73
1 MDPGDDWLVE SLRLYQDFYA FDLSGATRVL EWIDDKGVFV AGYESLKKNE ILHLKLPLRL
61 SVKENKGLFP ERDFKVRHGG FSDRSIFDLK HVPHTRLLVT SGLPGCYLQV WQVAEDSDVI
121 KAVSTIAVHE KEESLWPRVA VFSTLAPGVL HGARLRSLQV VDLESRKTTY TSDVSDSEEL
181 SSLQVLDADT FAFCCASGRL GLVDTRQKWA PLENRSPGPG SGGERWCAEV GSWGQGPGPS
241 IASLGSDGRL CLLDPRDLCH PVSSVQCPVS VPSPDPELLR VTWAPGLKNC LAISGFDGTV
301 QVYDATSWDG TRSQDGTRSQ VEPLFTHRGH IFLDGNGMDP APLVTTHTWH PCRPRTLLSA
361 TNDASLHVWD WVDLCAPRLocalizationUniProt · AlphaFold · HPA
Whether an antibody against WDR73 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.26
- Highest tissue expression
- 9.7 nTPM
Expression across tissuesHPA
Tissue
- retina: 9.7 nTPM
- skin: 5.8 nTPM
- bone marrow: 5.2 nTPM
- lymph node: 5.1 nTPM
- spleen: 5 nTPM
- thyroid gland: 4.9 nTPM
Single-cell type
- cardiomyocytes: 115 nCPM
- respiratory ciliated cells: 82 nCPM
- rod photoreceptor cells: 67 nCPM
- fallopian tube ciliated cells: 63 nCPM
- somatotrophs: 60 nCPM
- fibro-adipogenic progenitors: 58 nCPM
Immune cell
- naive B-cell: 1.7 nTPM
- basophil: 1.5 nTPM
- neutrophil: 1.5 nTPM
- gdT-cell: 1.3 nTPM
- MAIT T-cell: 1.1 nTPM
- naive CD4 T-cell: 1.1 nTPM
Brain region
- cerebellum: 24 nTPM
- white matter: 20 nTPM
- midbrain: 18 nTPM
- cerebral cortex: 17 nTPM
- basal ganglia: 17 nTPM
- choroid plexus: 17 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about WDR73.
Disease | AllUniProt
Conditions WDR73 is implicated in, by any mechanism.
- Galloway-Mowat syndrome 1 (GAMOS1) MIM:251300
Disease | GeneticClinVar
39 pathogenic / likely-pathogenic of 291 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Galloway-Mowat syndrome 1
- Nephrotic syndrome
- Inborn genetic diseases
- WDR73-related disorder
- Dystonic disorder
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.26
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.46
- DepMap mean gene effect
- -0.58
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- WD40 repeat
- WD40/YVTN repeat-like-containing domain superfamily
- WD40-repeat-containing domain superfamily
- WD repeat-containing protein 73
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of WDR73 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads WDR73 as an antibody target. Whether an autoantibody or antibody against WDR73 could matter depends on whether native WDR73 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
WDR73 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label WDR73 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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