Seroatlas · Human Serome Atlas

TMEM242

Transmembrane protein 242

Also known as: BM033, C6orf35, TM242_HUMAN

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q9NWH2
Gene
TMEM242
Ensembl
ENSG00000215712
Chromosome
6
Canonical length
141 aa
Protein class
Predicted membrane proteins, Transporters

OverviewNCBI Gene

Involved in mitochondrial proton-transporting ATP synthase complex assembly. Located in mitochondrial inner membrane. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

141 residues, UniProt reviewed canonical sequence.

>Q9NWH2|TMEM242
     1  METAGAATGQ PASGLEAPGS TNDRLFLVKG GIFLGTVAAA GMLAGFITTL SLAKKKSPEW
    61  FNKGSMATAA LPESGSSLAL RALGWGSLYA WCGVGVISFA VWKALGVHSM NDFRSKMQSI
   121  FPTIPKNSES AVEWEETLKS K

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against TMEM242 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Other membrane
Secreted
No
Transmembrane segments
2
Mean surface accessibility (rSASA)
0.55
Highest tissue expression
13 nTPM

Expression across tissuesHPA

Tissue

  • heart muscle: 13 nTPM
  • skeletal muscle: 11 nTPM
  • tongue: 11 nTPM
  • cerebral cortex: 11 nTPM
  • bone marrow: 10 nTPM
  • blood vessel: 10 nTPM

Single-cell type

  • myonuclei: 82 nCPM
  • extravillous trophoblasts: 68 nCPM
  • esophageal suprabasal cells: 68 nCPM
  • migrating cytotrophoblasts: 66 nCPM
  • cytotrophoblasts: 65 nCPM
  • decidual stromal cells: 65 nCPM

Immune cell

  • plasmacytoid DC: 30 nTPM
  • naive B-cell: 20 nTPM
  • classical monocyte: 20 nTPM
  • memory B-cell: 19 nTPM
  • myeloid DC: 19 nTPM
  • NK-cell: 17 nTPM

Brain region

  • cerebral cortex: 16 nTPM
  • basal ganglia: 16 nTPM
  • cerebellum: 15 nTPM
  • thalamus: 15 nTPM
  • hypothalamus: 15 nTPM
  • hippocampal formation: 15 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.6
gnomAD pLI
0
gnomAD missense Z
0.25
DepMap mean gene effect
-0.4
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Cellular components

Protein domainsUniProt · Pfam · InterPro

  • Transmembrane protein 242
  • Protein of unknown function (DUF1358)

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of TMEM242 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads TMEM242 as an antibody target. Whether an autoantibody or antibody against TMEM242 could matter depends on whether native TMEM242 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

TMEM242 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label TMEM242 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/TMEM242. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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