TAAR1
Trace amine-associated receptor 1
Also known as: TA1, TAAR1_HUMAN, TAR1, TRAR1
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q96RJ0
- Gene
- TAAR1
- Ensembl
- ENSG00000146399
- Chromosome
- 6
- Canonical length
- 339 aa
- Protein class
- FDA approved drug targets, G-protein coupled receptors, Predicted membrane proteins
OverviewNCBI Gene
The protein encoded by this gene is a G-protein coupled receptor activated by trace amines. The encoded protein responds little or not at all to dopamine, serotonin, epinephrine, or histamine, but responds well to beta-phenylethylamine, p-tyramine, octopamine, and tryptamine. While primarily functioning in neurologic systems, there is evidence that this gene is involved in blood cell and immunologic functions as well. This gene is thought to be intronless. [provided by RefSeq, Nov 2015]
Canonical amino-acid sequenceUniProt
339 residues, UniProt reviewed canonical sequence.
>Q96RJ0|TAAR1
1 MMPFCHNIIN ISCVKNNWSN DVRASLYSLM VLIILTTLVG NLIVIVSISH FKQLHTPTNW
61 LIHSMATVDF LLGCLVMPYS MVRSAEHCWY FGEVFCKIHT STDIMLSSAS IFHLSFISID
121 RYYAVCDPLR YKAKMNILVI CVMIFISWSV PAVFAFGMIF LELNFKGAEE IYYKHVHCRG
181 GCSVFFSKIS GVLTFMTSFY IPGSIMLCVY YRIYLIAKEQ ARLISDANQK LQIGLEMKNG
241 ISQSKERKAV KTLGIVMGVF LICWCPFFIC TVMDPFLHYI IPPTLNDVLI WFGYLNSTFN
301 PMVYAFFYPW FRKALKMMLF GKIFQKDSSR CKLFLELSSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TAAR1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 7
- Mean surface accessibility (rSASA)
- 0.28
- Highest tissue expression
- 4.7 nTPM
Expression across tissuesHPA
Tissue
- stomach: 4.7 nTPM
- fallopian tube: 0.7 nTPM
- bone marrow: 0.1 nTPM
- duodenum: 0.1 nTPM
- kidney: 0.1 nTPM
- salivary gland: 0.1 nTPM
Single-cell type
- fallopian tube ciliated cells: 11 nCPM
- neutrophils: 6.4 nCPM
- neuroendocrine cells: 4.2 nCPM
- endometrial glandular cells: 1.7 nCPM
- prostatic club cells: 1.4 nCPM
- mucous neck cells: 1.2 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- cerebral cortex: 0.7 nTPM
- pons: 0.3 nTPM
- amygdala: 0 nTPM
- basal ganglia: 0 nTPM
- cerebellum: 0 nTPM
- choroid plexus: 0 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.43
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.69
- DepMap mean gene effect
- 0.02
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- adenylate cyclase-activating G protein-coupled receptor signaling pathway
- adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
- G protein-coupled receptor signaling pathway
- phospholipase C-activating G protein-coupled receptor signaling pathway
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TAAR1 as an antibody target. Whether an autoantibody or antibody against TAAR1 could matter depends on whether native TAAR1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TAAR1 is annotated at the cell surface, where native TAAR1 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label TAAR1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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