RASSF4
Ras association domain-containing protein 4
Also known as: AD037, MGC44914, RASF4_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9H2L5
- Gene
- RASSF4
- Ensembl
- ENSG00000107551
- Chromosome
- 10
- Canonical length
- 321 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Nucleoli,Cell Junctions,Cytokinetic bridge,Mitotic spindle,Cytosol
OverviewNCBI Gene
The function of this gene has not yet been determined but may involve a role in tumor suppression. Alternative splicing of this gene results in several transcript variants; however, most of the variants have not been fully described. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
321 residues, UniProt reviewed canonical sequence.
>Q9H2L5|RASSF4
1 MKEDCLPSSH VPISDSKSIQ KSELLGLLKT YNCYHEGKSF QLRHREEEGT LIIEGLLNIA
61 WGLRRPIRLQ MQDDREQVHL PSTSWMPRRP SCPLKEPSPQ NGNITAQGPS IQPVHKAESS
121 TDSSGPLEEA EEAPQLMRTK SDASCMSQRR PKCRAPGEAQ RIRRHRFSIN GHFYNHKTSV
181 FTPAYGSVTN VRVNSTMTTL QVLTLLLNKF RVEDGPSEFA LYIVHESGER TKLKDCEYPL
241 ISRILHGPCE KIARIFLMEA DLGVEVPHEV AQYIKFEMPV LDSFVEKLKE EEEREIIKLT
301 MKFQALRLTM LQRLEQLVEA KLocalizationUniProt · AlphaFold · HPA
Whether an antibody against RASSF4 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Unknown
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.43
- Highest tissue expression
- 77 nTPM
Expression across tissuesHPA
Tissue
- kidney: 77 nTPM
- midbrain: 55 nTPM
- heart muscle: 43 nTPM
- spinal cord: 43 nTPM
- thyroid gland: 40 nTPM
- basal ganglia: 40 nTPM
Single-cell type
- proximal tubule cells: 407 nCPM
- bergmann glia: 303 nCPM
- hofbauer cells: 286 nCPM
- müller glia: 266 nCPM
- myosatellite cells: 200 nCPM
- adipocytes: 182 nCPM
Immune cell
- classical monocyte: 85 nTPM
- myeloid DC: 84 nTPM
- intermediate monocyte: 64 nTPM
- total PBMC: 49 nTPM
- non-classical monocyte: 38 nTPM
- gdT-cell: 8.7 nTPM
Brain region
- white matter: 76 nTPM
- basal ganglia: 74 nTPM
- pons: 72 nTPM
- thalamus: 69 nTPM
- cerebellum: 67 nTPM
- midbrain: 67 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.55
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.14
- DepMap mean gene effect
- 0
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Protein domainsUniProt · Pfam · InterPro
- Ras-associating domain
- SARAH domain
- Ubiquitin-like domain superfamily
- Ras association domain-containing protein 1-6
- Ras association (RalGDS/AF-6) domain
- Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
- Ras association domain-containing protein 4, RA domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of RASSF4 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads RASSF4 as an antibody target. Whether an autoantibody or antibody against RASSF4 could matter depends on whether native RASSF4 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
RASSF4 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label RASSF4 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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