PRKX
cAMP-dependent protein kinase catalytic subunit PRKX
Also known as: PKX1, PRKX_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P51817
- Gene
- PRKX
- Ensembl
- ENSG00000183943
- Chromosome
- X
- Canonical length
- 358 aa
- Protein class
- Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm
OverviewNCBI Gene
This gene encodes a serine threonine protein kinase that has similarity to the catalytic subunit of cyclic AMP dependent protein kinases. The encoded protein is developmentally regulated and may be involved in renal epithelial morphogenesis. This protein may also be involved in macrophage and granulocyte maturation. Abnormal recombination between this gene and a related pseudogene on chromosome Y is a frequent cause of sex reversal disorder in XX males and XY females. Pseudogenes of this gene are found on chromosomes X, 15 and Y. [provided by RefSeq, Feb 2010]
Canonical amino-acid sequenceUniProt
358 residues, UniProt reviewed canonical sequence.
>P51817|PRKX
1 MEAPGLAQAA AAESDSRKVA EETPDGAPAL CPSPEALSPE PPVYSLQDFD TLATVGTGTF
61 GRVHLVKEKT AKHFFALKVM SIPDVIRLKQ EQHVHNEKSV LKEVSHPFLI RLFWTWHDER
121 FLYMLMEYVP GGELFSYLRN RGRFSSTTGL FYSAEIICAI EYLHSKEIVY RDLKPENILL
181 DRDGHIKLTD FGFAKKLVDR TWTLCGTPEY LAPEVIQSKG HGRAVDWWAL GILIFEMLSG
241 FPPFFDDNPF GIYQKILAGK IDFPRHLDFH VKDLIKKLLV VDRTRRLGNM KNGANDVKHH
301 RWFRSVDWEA VPQRKLKPPI VPKIAGDGDT SNFETYPEND WDTAAPVPQK DLEIFKNFLocalizationUniProt · AlphaFold · HPA
Whether an antibody against PRKX can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.29
- Highest tissue expression
- 32 nTPM
Expression across tissuesHPA
Tissue
- thyroid gland: 32 nTPM
- fallopian tube: 18 nTPM
- thymus: 14 nTPM
- esophagus: 13 nTPM
- lymph node: 12 nTPM
- kidney: 12 nTPM
Single-cell type
- mast cells: 658 nCPM
- endometrial glandular cells: 423 nCPM
- endometrial luminal cells: 366 nCPM
- nk-cells: 338 nCPM
- loop of henle epithelial cells: 310 nCPM
- endometrial ciliated cells: 290 nCPM
Immune cell
- basophil: 11 nTPM
- non-classical monocyte: 3.2 nTPM
- MAIT T-cell: 2.4 nTPM
- NK-cell: 2.4 nTPM
- gdT-cell: 2.3 nTPM
- intermediate monocyte: 2.3 nTPM
Brain region
- medulla oblongata: 33 nTPM
- white matter: 29 nTPM
- thalamus: 27 nTPM
- spinal cord: 26 nTPM
- hypothalamus: 25 nTPM
- midbrain: 24 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.9
- gnomAD pLI
- 0.03
- gnomAD missense Z
- 1.6
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- adenylate cyclase-activating G protein-coupled receptor signaling pathway
- angiogenesis
- cell adhesion
- cell-substrate adhesion
- endothelial cell migration
- endothelial cell proliferation
- kidney morphogenesis
- myeloid cell differentiation
- peptidyl-serine phosphorylation
- protein autophosphorylation
- regulation of cell adhesion
- regulation of cell migration
- epithelial tube morphogenesis
- regulation of epithelial cell differentiation involved in kidney development
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of PRKX in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads PRKX as an antibody target. Whether an autoantibody or antibody against PRKX could matter depends on whether native PRKX is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
PRKX is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label PRKX as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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