KCNG4
Voltage-gated potassium channel regulatory subunit KCNG4
Also known as: KCNG4_HUMAN, Kv6.4
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q8TDN1
- Gene
- KCNG4
- Ensembl
- ENSG00000168418
- Chromosome
- 16
- Canonical length
- 519 aa
- Protein class
- Predicted membrane proteins, Transporters, Voltage-gated ion channels
- Subcellular location
- Nucleoplasm,Plasma membrane
- Quaternary structure
- Homomultimer
OverviewNCBI Gene
Voltage-gated potassium (Kv) channels represent the most complex class of voltage-gated ion channels from both functional and structural standpoints. Their diverse functions include regulating neurotransmitter release, heart rate, insulin secretion, neuronal excitability, epithelial electrolyte transport, smooth muscle contraction, and cell volume. This gene encodes a member of the potassium channel, voltage-gated, subfamily G. This member functions as a modulatory subunit. The gene has strong expression in brain. Multiple alternatively spliced variants have been found in normal and cancerous tissues. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
519 residues, UniProt reviewed canonical sequence.
>Q8TDN1|KCNG4
1 MPMPSRDGGL HPRHHHYGSH SPWSQLLSSP METPSIKGLY YRRVRKVGAL DASPVDLKKE
61 ILINVGGRRY LLPWSTLDRF PLSRLSKLRL CRSYEEIVQL CDDYDEDSQE FFFDRSPSAF
121 GVIVSFLAAG KLVLLQEMCA LSFQEELAYW GIEEAHLERC CLRKLLRKLE ELEELAKLHR
181 EDVLRQQRET RRPASHSSRW GLCMNRLREM VENPQSGLPG KVFACLSILF VATTAVSLCV
241 STMPDLRAEE DQGECSRKCY YIFIVETICV AWFSLEFCLR FVQAQDKCQF FQGPLNIIDI
301 LAISPYYVSL AVSEEPPEDG ERPSGSSYLE KVGLVLRVLR ALRILYVMRL ARHSLGLQTL
361 GLTVRRCTRE FGLLLLFLAV AITLFSPLVY VAEKESGRVL EFTSIPASYW WAIISMTTVG
421 YGDMVPRSVP GQMVALSSIL SGILIMAFPA TSIFHTFSHS YLELKKEQEQ LQARLRHLQN
481 TGPASECELL DPHVASEHEL MNDVNDLILE GPALPIMHMLocalizationUniProt · AlphaFold · HPA
Whether an antibody against KCNG4 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 6
- Mean surface accessibility (rSASA)
- 0.38
- Highest tissue expression
- 3.6 nTPM
Expression across tissuesHPA
Tissue
- retina: 3.6 nTPM
- midbrain: 0.6 nTPM
- amygdala: 0.5 nTPM
- hippocampal formation: 0.5 nTPM
- hypothalamus: 0.4 nTPM
- adrenal gland: 0.3 nTPM
Single-cell type
- retinal bipolar cells: 74 nCPM
- oligodendrocyte progenitor cells: 12 nCPM
- thyrotrophs: 7.8 nCPM
- retinal ganglion cells: 3.9 nCPM
- epicardial cells: 2.3 nCPM
- müller glia: 2.3 nCPM
Immune cell
- basophil: 0.4 nTPM
- neutrophil: 0.2 nTPM
- eosinophil: 0.1 nTPM
- naive B-cell: 0.1 nTPM
- naive CD8 T-cell: 0.1 nTPM
- NK-cell: 0.1 nTPM
Brain region
- medulla oblongata: 8.4 nTPM
- cerebellum: 8.2 nTPM
- pons: 6.4 nTPM
- midbrain: 4.7 nTPM
- spinal cord: 4.4 nTPM
- white matter: 4.3 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.89
- gnomAD pLI
- 0
- gnomAD missense Z
- -1.66
- DepMap mean gene effect
- -0.01
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- action potential
- potassium ion transmembrane transport
- protein homooligomerization
- regulation of potassium ion transmembrane transport
- regulation of potassium ion transport
Molecular functions
- potassium channel regulator activity
- transmembrane transporter binding
- voltage-gated potassium channel activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads KCNG4 as an antibody target. Whether an autoantibody or antibody against KCNG4 could matter depends on whether native KCNG4 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
KCNG4 is annotated at the cell surface, where native KCNG4 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label KCNG4 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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