Seroatlas · Human Serome Atlas

IGFN1

Immunoglobulin-like and fibronectin type III domain-containing protein 1

Also known as: DKFZp434B1231, EEF1A2BP1, IGFN1_HUMAN

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q86VF2
Gene
IGFN1
Ensembl
ENSG00000163395
Chromosome
1
Canonical length
1251 aa
Protein class
Predicted intracellular proteins
Subcellular location
Midbody ring

OverviewNCBI Gene

Predicted to act upstream of or within myoblast differentiation and myoblast fusion. Predicted to be located in Z disc and nucleus. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

1251 residues, UniProt reviewed canonical sequence.

>Q86VF2|IGFN1
     1  MAGKLRKSHI PGVSIWQLVE EIPEGCSTPD FEQKPVTSAL PEGKNAVFRA VVCGEPRPEV
    61  RWQNSKGDLS DSSKYKISSS PGSKEHVLQI NKLTGEDTDL YRCTAVNAYG EAACSVRLTV
   121  IEVGFRKNRK RHREPQEDLR KELMDFRKLL KKRAPPAPKK KMDLEQIWQL LMTADRKDYE
   181  KICLKYGIVD YRGMLRRLQE MKKEQEDKMA QYINTISSLR HIRVTKDGNA KFDLELDLKD
   241  SQSKIYLYKD GEMIPYGFNN QTKHCLRRLG KRYEFQIQDL RPEDSGIYQV KVEDAVVFST
   301  ELEASAIPPR VVVPLAETHC EEQGDAVFEC TLSSPCPSAA WHFRHRLLHP SDKYEVYVSP
   361  DGLTHRLVVR GARFSDMGPY SLGTGLYTSS AWLVVEAGKD KDLQSTSADH KLQSRRSGKD
   421  GRLDIYGERR DATRSSTSRY KPGTGSFSKD AQGPMGHFSQ GLADMEVQPG EAATLSCTLT
   481  SDLGPGTWFK DGVKLTTQDG VIFKQDGLVH SLFITHVQGT QAGRYTFVAG DQQSEATLTV
   541  QDSPTIAPDV TEKLREPLVV KAGKPVIVKI PFQSHLPIQA AWRKDGAEVV GSSDREAQVD
   601  LGDGYTRLCL PSAGRKDCGQ YSVTLRSEGG SVQAELTLQV IDKPDPPQGP MEVQDCHRAG
   661  VCLRWRPPRD NGGRTVECYV VERRQAGRST WLKVGEAPAD STTFTDAHVE PGRKYTFRVR
   721  AVTSEGAGEA LESEEILVAP EALPKAPSAP AILSASSQGI TLTWTAPRGP GSAHILGYLI
   781  ERRKKGSNTW TAVNDQPVPE RRWTVADVRQ GCQYEFRVTA VAPSGPGEPG PPSDAVFARD
   841  PMRPPGLVRN LQVTDRSNTS ITLSWAGPDT QEGDEAQGYV VELCSSDSLQ WLPCHVGTVP
   901  VTTYTAKGLR PGEGYFVRVT AVNEGGQSQP SALDTLVQAM PVTVCPKFLV DSSTKDLLTV
   961  KVGDTVRVPV SFEAMPMPEV TWLKDGLPLP KRSVTVTKDG LTQLLIPVAG LSDSGLYTVV
  1021  LRTLQGKEVA HSFRIRVAAC PQAPGPIHLQ ENVPGTVTAE WEPSPDEAQD VPLHYAVFTR
  1081  SSAHGPWHEA ADRIHTNRFT LLGILPGHEY HFRVVAKNEL GASKPSDTSQ PWCIPRQRDR
  1141  FTVKAPCYRE PDLSQKPRFL VGLRSHLLPQ GCECCMSCAV QGSPRPHVTW FKNDRSLEGN
  1201  PAVYSTDLLG VCSLTIPSVS PKDSGEYKAV AENTLGQAVS TATLIVIEPS T

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against IGFN1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Intracellular
Secreted
No
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.34
Highest tissue expression
175 nTPM

Expression across tissuesHPA

Tissue

  • skeletal muscle: 175 nTPM
  • thyroid gland: 24 nTPM
  • epididymis: 14 nTPM
  • pancreas: 11 nTPM
  • endometrium: 9.8 nTPM
  • cerebral cortex: 2.9 nTPM

Single-cell type

  • thymic myoid cells: 295 nCPM
  • pancreatic acinar cells: 86 nCPM
  • myonuclei: 82 nCPM
  • leydig cells: 47 nCPM
  • astrocytes: 22 nCPM
  • peritubular myoid cells: 17 nCPM

Immune cell

  • basophil: 0 nTPM
  • classical monocyte: 0 nTPM
  • eosinophil: 0 nTPM
  • gdT-cell: 0 nTPM
  • intermediate monocyte: 0 nTPM
  • MAIT T-cell: 0 nTPM

Brain region

  • hippocampal formation: 3 nTPM
  • choroid plexus: 1.8 nTPM
  • hypothalamus: 1.6 nTPM
  • amygdala: 1 nTPM
  • thalamus: 1 nTPM
  • cerebral cortex: 0.8 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
0.94
gnomAD pLI
0
gnomAD missense Z
0.22
DepMap mean gene effect
-0.15
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of IGFN1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads IGFN1 as an antibody target. Whether an autoantibody or antibody against IGFN1 could matter depends on whether native IGFN1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

IGFN1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label IGFN1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/IGFN1. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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