IGFN1
Immunoglobulin-like and fibronectin type III domain-containing protein 1
Also known as: DKFZp434B1231, EEF1A2BP1, IGFN1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q86VF2
- Gene
- IGFN1
- Ensembl
- ENSG00000163395
- Chromosome
- 1
- Canonical length
- 1251 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Midbody ring
OverviewNCBI Gene
Predicted to act upstream of or within myoblast differentiation and myoblast fusion. Predicted to be located in Z disc and nucleus. [provided by Alliance of Genome Resources, Jul 2025]
Canonical amino-acid sequenceUniProt
1251 residues, UniProt reviewed canonical sequence.
>Q86VF2|IGFN1
1 MAGKLRKSHI PGVSIWQLVE EIPEGCSTPD FEQKPVTSAL PEGKNAVFRA VVCGEPRPEV
61 RWQNSKGDLS DSSKYKISSS PGSKEHVLQI NKLTGEDTDL YRCTAVNAYG EAACSVRLTV
121 IEVGFRKNRK RHREPQEDLR KELMDFRKLL KKRAPPAPKK KMDLEQIWQL LMTADRKDYE
181 KICLKYGIVD YRGMLRRLQE MKKEQEDKMA QYINTISSLR HIRVTKDGNA KFDLELDLKD
241 SQSKIYLYKD GEMIPYGFNN QTKHCLRRLG KRYEFQIQDL RPEDSGIYQV KVEDAVVFST
301 ELEASAIPPR VVVPLAETHC EEQGDAVFEC TLSSPCPSAA WHFRHRLLHP SDKYEVYVSP
361 DGLTHRLVVR GARFSDMGPY SLGTGLYTSS AWLVVEAGKD KDLQSTSADH KLQSRRSGKD
421 GRLDIYGERR DATRSSTSRY KPGTGSFSKD AQGPMGHFSQ GLADMEVQPG EAATLSCTLT
481 SDLGPGTWFK DGVKLTTQDG VIFKQDGLVH SLFITHVQGT QAGRYTFVAG DQQSEATLTV
541 QDSPTIAPDV TEKLREPLVV KAGKPVIVKI PFQSHLPIQA AWRKDGAEVV GSSDREAQVD
601 LGDGYTRLCL PSAGRKDCGQ YSVTLRSEGG SVQAELTLQV IDKPDPPQGP MEVQDCHRAG
661 VCLRWRPPRD NGGRTVECYV VERRQAGRST WLKVGEAPAD STTFTDAHVE PGRKYTFRVR
721 AVTSEGAGEA LESEEILVAP EALPKAPSAP AILSASSQGI TLTWTAPRGP GSAHILGYLI
781 ERRKKGSNTW TAVNDQPVPE RRWTVADVRQ GCQYEFRVTA VAPSGPGEPG PPSDAVFARD
841 PMRPPGLVRN LQVTDRSNTS ITLSWAGPDT QEGDEAQGYV VELCSSDSLQ WLPCHVGTVP
901 VTTYTAKGLR PGEGYFVRVT AVNEGGQSQP SALDTLVQAM PVTVCPKFLV DSSTKDLLTV
961 KVGDTVRVPV SFEAMPMPEV TWLKDGLPLP KRSVTVTKDG LTQLLIPVAG LSDSGLYTVV
1021 LRTLQGKEVA HSFRIRVAAC PQAPGPIHLQ ENVPGTVTAE WEPSPDEAQD VPLHYAVFTR
1081 SSAHGPWHEA ADRIHTNRFT LLGILPGHEY HFRVVAKNEL GASKPSDTSQ PWCIPRQRDR
1141 FTVKAPCYRE PDLSQKPRFL VGLRSHLLPQ GCECCMSCAV QGSPRPHVTW FKNDRSLEGN
1201 PAVYSTDLLG VCSLTIPSVS PKDSGEYKAV AENTLGQAVS TATLIVIEPS TLocalizationUniProt · AlphaFold · HPA
Whether an antibody against IGFN1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.34
- Highest tissue expression
- 175 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 175 nTPM
- thyroid gland: 24 nTPM
- epididymis: 14 nTPM
- pancreas: 11 nTPM
- endometrium: 9.8 nTPM
- cerebral cortex: 2.9 nTPM
Single-cell type
- thymic myoid cells: 295 nCPM
- pancreatic acinar cells: 86 nCPM
- myonuclei: 82 nCPM
- leydig cells: 47 nCPM
- astrocytes: 22 nCPM
- peritubular myoid cells: 17 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- hippocampal formation: 3 nTPM
- choroid plexus: 1.8 nTPM
- hypothalamus: 1.6 nTPM
- amygdala: 1 nTPM
- thalamus: 1 nTPM
- cerebral cortex: 0.8 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.94
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.22
- DepMap mean gene effect
- -0.15
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Immunoglobulin subtype 2
- Immunoglobulin domain subtype
- Fibronectin type III
- Immunoglobulin-like domain
- Immunoglobulin I-set
- Immunoglobulin-like fold
- Fibronectin type III superfamily
- Immunoglobulin-like domain superfamily
- MyBP-C, tri-helix bundle domain
- Striated Muscle Structural and Regulatory Protein
- Fibronectin type III domain
- Immunoglobulin I-set domain
- Tri-helix bundle domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of IGFN1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads IGFN1 as an antibody target. Whether an autoantibody or antibody against IGFN1 could matter depends on whether native IGFN1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
IGFN1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label IGFN1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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