DIMT1
Dimethyladenosine transferase
Also known as: DIM1_HUMAN, DIMT1L, HSA9761
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9UNQ2
- Gene
- DIMT1
- Ensembl
- ENSG00000086189
- Chromosome
- 5
- Canonical length
- 313 aa
- Protein class
- Enzymes, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Nucleoli,Nucleoli rim,Cytosol
OverviewNCBI Gene
The protein encoded by this gene is a methyltransferase that is responsible for dimethylation of adjacent adenosines near the 18S rRNA decoding site. The encoded protein is essential for ribosome biogenesis, although its catalytic activity is not involved in the process. The yeast ortholog of this protein functions in the cytoplasm while this protein functions in the nucleus. [provided by RefSeq, Jan 2017]
Canonical amino-acid sequenceUniProt
313 residues, UniProt reviewed canonical sequence.
>Q9UNQ2|DIMT1
1 MPKVKSGAIG RRRGRQEQRR ELKSAGGLMF NTGIGQHILK NPLIINSIID KAALRPTDVV
61 LEVGPGTGNM TVKLLEKAKK VVACELDPRL VAELHKRVQG TPVASKLQVL VGDVLKTDLP
121 FFDTCVANLP YQISSPFVFK LLLHRPFFRC AILMFQREFA LRLVAKPGDK LYCRLSINTQ
181 LLARVDHLMK VGKNNFRPPP KVESSVVRIE PKNPPPPINF QEWDGLVRIT FVRKNKTLSA
241 AFKSSAVQQL LEKNYRIHCS VHNIIIPEDF SIADKIQQIL TSTGFSDKRA RSMDIDDFIR
301 LLHGFNAEGI HFSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against DIMT1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.28
- Highest tissue expression
- 24 nTPM
Expression across tissuesHPA
Tissue
- urinary bladder: 24 nTPM
- blood vessel: 20 nTPM
- smooth muscle: 20 nTPM
- breast: 18 nTPM
- pancreas: 18 nTPM
- adipose tissue: 17 nTPM
Single-cell type
- cardiomyocytes: 79 nCPM
- cone photoreceptor cells: 77 nCPM
- migrating cytotrophoblasts: 73 nCPM
- decidual stromal cells: 71 nCPM
- esophageal basal cells: 69 nCPM
- megakaryocytes: 68 nCPM
Immune cell
- MAIT T-cell: 13 nTPM
- plasmacytoid DC: 12 nTPM
- naive CD4 T-cell: 12 nTPM
- memory CD4 T-cell: 11 nTPM
- memory B-cell: 10 nTPM
- naive CD8 T-cell: 9.7 nTPM
Brain region
- hypothalamus: 1.7 nTPM
- cerebellum: 1.3 nTPM
- midbrain: 1.3 nTPM
- pons: 1.3 nTPM
- spinal cord: 1.3 nTPM
- white matter: 1.3 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.04
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.32
- DepMap mean gene effect
- -1.26
- DepMap dependency class
- pan
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
- RNA binding
- rRNA (adenine-N6,N6-)-dimethyltransferase activity
- 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of DIMT1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads DIMT1 as an antibody target. Whether an autoantibody or antibody against DIMT1 could matter depends on whether native DIMT1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
DIMT1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label DIMT1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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