CD55
Complement decay-accelerating factor
Also known as: CR, CROM, DAF, DAF_HUMAN, TC
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P08174
- Gene
- CD55
- Ensembl
- ENSG00000196352
- Chromosome
- 1
- Canonical length
- 381 aa
- Protein class
- Blood group antigen proteins, CD markers, Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins
- Secretome location
- Secreted to blood
- Quaternary structure
- Homodimer
OverviewNCBI Gene
This gene encodes a glycoprotein involved in the regulation of the complement cascade. Binding of the encoded protein to complement proteins accelerates their decay, thereby disrupting the cascade and preventing damage to host cells. Antigens present on this protein constitute the Cromer blood group system (CROM). Alternative splicing results in multiple transcript variants. The predominant transcript variant encodes a membrane-bound protein, but alternatively spliced transcripts may produce soluble proteins. [provided by RefSeq, Jul 2014]
Canonical amino-acid sequenceUniProt
381 residues, UniProt reviewed canonical sequence.
>P08174|CD55
1 MTVARPSVPA ALPLLGELPR LLLLVLLCLP AVWGDCGLPP DVPNAQPALE GRTSFPEDTV
61 ITYKCEESFV KIPGEKDSVI CLKGSQWSDI EEFCNRSCEV PTRLNSASLK QPYITQNYFP
121 VGTVVEYECR PGYRREPSLS PKLTCLQNLK WSTAVEFCKK KSCPNPGEIR NGQIDVPGGI
181 LFGATISFSC NTGYKLFGST SSFCLISGSS VQWSDPLPEC REIYCPAPPQ IDNGIIQGER
241 DHYGYRQSVT YACNKGFTMI GEHSIYCTVN NDEGEWSGPP PECRGKSLTS KVPPTVQKPT
301 TVNVPTTEVS PTSQKTTTKT TTPNAQATRS TPVSRTTKHF HETTPNKGSG TTSGTTRLLS
361 GHTCFTLTGL LGTLVTMGLL TLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CD55 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.47
- Highest tissue expression
- 211 nTPM
Expression across tissuesHPA
Tissue
- lung: 211 nTPM
- urinary bladder: 169 nTPM
- adrenal gland: 151 nTPM
- salivary gland: 115 nTPM
- skeletal muscle: 113 nTPM
- blood vessel: 104 nTPM
Single-cell type
- neutrophils: 7,705 nCPM
- alveolar cells type 1: 2,488 nCPM
- ocular epithelial cells: 1,980 nCPM
- epicardial cells: 1,904 nCPM
- esophageal apical cells: 1,430 nCPM
- neutrophil progenitors: 1,332 nCPM
Immune cell
- neutrophil: 653 nTPM
- basophil: 321 nTPM
- eosinophil: 249 nTPM
- non-classical monocyte: 225 nTPM
- classical monocyte: 175 nTPM
- intermediate monocyte: 174 nTPM
Brain region
- white matter: 57 nTPM
- hypothalamus: 51 nTPM
- cerebral cortex: 44 nTPM
- pons: 43 nTPM
- basal ganglia: 38 nTPM
- thalamus: 37 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about CD55.
Disease | AllUniProt
Conditions CD55 is implicated in, by any mechanism.
- Complement hyperactivation, angiopathic thrombosis, and protein-losing enteropathy (CHAPLE) MIM:226300
Disease | GeneticClinVar
28 pathogenic / likely-pathogenic of 292 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Complement hyperactivation-angiopathic thrombosis-protein-losing enteropathy syndrome
- CD55-related disorder
- Cromer blood group system
- CROMER BLOOD GROUP SYSTEM, Dr(a-) PHENOTYPE
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.27
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.92
- DepMap mean gene effect
- -0.07
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- complement activation, classical pathway
- innate immune response
- negative regulation of complement activation
- positive regulation of CD4-positive, alpha-beta T cell activation
- positive regulation of CD4-positive, alpha-beta T cell proliferation
- positive regulation of cytosolic calcium ion concentration
- positive regulation of T cell cytokine production
- regulation of complement activation
- regulation of complement-dependent cytotoxicity
- regulation of lipopolysaccharide-mediated signaling pathway
- respiratory burst
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CD55 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CD55 as an antibody target. Whether an autoantibody or antibody against CD55 could matter depends on whether native CD55 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CD55 is annotated at the cell surface, where native CD55 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label CD55 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...