CD244
Natural killer cell receptor 2B4
Also known as: 2B4, CD244_HUMAN, NAIL, NKR2B4, Nmrk, SLAMF4
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9BZW8
- Gene
- CD244
- Ensembl
- ENSG00000122223
- Chromosome
- 1
- Canonical length
- 370 aa
- Protein class
- CD markers, Human disease related genes, Plasma proteins, Predicted membrane proteins
OverviewNCBI Gene
This gene encodes a cell surface receptor expressed on natural killer (NK) cells (and some T cells) that mediate non-major histocompatibility complex (MHC) restricted killing. The interaction between NK-cell and target cells via this receptor is thought to modulate NK-cell cytolytic activity. Alternatively spliced transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Oct 2009]
Canonical amino-acid sequenceUniProt
370 residues, UniProt reviewed canonical sequence.
>Q9BZW8|CD244
1 MLGQVVTLIL LLLLKVYQGK GCQGSADHVV SISGVPLQLQ PNSIQTKVDS IAWKKLLPSQ
61 NGFHHILKWE NGSLPSNTSN DRFSFIVKNL SLLIKAAQQQ DSGLYCLEVT SISGKVQTAT
121 FQVFVFESLL PDKVEKPRLQ GQGKILDRGR CQVALSCLVS RDGNVSYAWY RGSKLIQTAG
181 NLTYLDEEVD INGTHTYTCN VSNPVSWESH TLNLTQDCQN AHQEFRFWPF LVIIVILSAL
241 FLGTLACFCV WRRKRKEKQS ETSPKEFLTI YEDVKDLKTR RNHEQEQTFP GGGSTIYSMI
301 QSQSSAPTSQ EPAYTLYSLI QPSRKSGSRK RNHSPSFNST IYEVIGKSQP KAQNPARLSR
361 KELENFDVYSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CD244 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.46
- Highest tissue expression
- 16 nTPM
Expression across tissuesHPA
Tissue
- spleen: 16 nTPM
- bone marrow: 9.4 nTPM
- liver: 3.9 nTPM
- appendix: 3.5 nTPM
- lymph node: 3.2 nTPM
- lung: 3.1 nTPM
Single-cell type
- nk-cells: 76 nCPM
- hematopoietic stem cells: 34 nCPM
- kupffer cells: 34 nCPM
- thymocytes: 27 nCPM
- t-cells: 23 nCPM
- monocytes: 19 nCPM
Immune cell
- basophil: 474 nTPM
- eosinophil: 108 nTPM
- NK-cell: 79 nTPM
- non-classical monocyte: 74 nTPM
- gdT-cell: 72 nTPM
- total PBMC: 71 nTPM
Brain region
- cerebral cortex: 0.5 nTPM
- medulla oblongata: 0.5 nTPM
- white matter: 0.4 nTPM
- midbrain: 0.3 nTPM
- pons: 0.3 nTPM
- spinal cord: 0.3 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.58
- gnomAD pLI
- 0.06
- gnomAD missense Z
- 0.3
- DepMap mean gene effect
- 0
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- adaptive immune response
- immune response
- natural killer cell activation
- natural killer cell activation involved in immune response
- positive regulation of granzyme B production
- positive regulation of inositol phosphate biosynthetic process
- positive regulation of interleukin-8 production
- positive regulation of type II interferon production
- signal transduction
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Immunoglobulin-like domain
- Immunoglobulin-like fold
- CD2/SLAM family receptor
- Immunoglobulin-like domain superfamily
- Natural killer cell receptor 2B4, immunoglobulin domain
- Natural killer cell receptor 2B4
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CD244 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CD244 as an antibody target. Whether an autoantibody or antibody against CD244 could matter depends on whether native CD244 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CD244 is annotated at the cell surface, where native CD244 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label CD244 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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