Seroatlas · Human Serome Atlas

ANKLE1

Ankyrin repeat and LEM domain-containing protein 1

Also known as: ANKL1_HUMAN, ANKRD41, FLJ39369, LEMD6

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q8NAG6
Gene
ANKLE1
Ensembl
ENSG00000160117
Chromosome
19
Canonical length
615 aa
Protein class
Predicted intracellular proteins, Predicted membrane proteins
Subcellular location
Nucleoplasm,Cytosol

OverviewNCBI Gene

Enables endonuclease activity. Involved in DNA damage response and protein export from nucleus. Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

615 residues, UniProt reviewed canonical sequence.

>Q8NAG6|ANKLE1
     1  MCSEARLARR LRDALREEEP WAVEELLRCG ADPNLVLEDG AAAVHLAAGA RHPRGLRCLG
    61  ALLRQGGDPN ARSVEALTPL HVAAAWGCRR GLELLLSQGA DPALRDQDGL RPLDLALQQG
   121  HLECARVLQD LDTRTRTRTR IGAETQEPEP APGTPGLSGP TDETLDSIAL QKQPCRGDNR
   181  DIGLEADPGP PSLPVPLETV DKHGSSASPP GHWDYSSDAS FVTAVEVSGA EDPASDTPPW
   241  AGSLPPTRQG LLHVVHANQR VPRSQGTEAE LNARLQALTL TPPNAAGFQS SPSSMPLLDR
   301  SPAHSPPRTP TPGASDCHCL WEHQTSIDSD MATLWLTEDE ASSTGGREPV GPCRHLPVST
   361  VSDLELLKGL RALGENPHPI TPFTRQLYHQ QLEEAQIAPG PEFSGHSLEL AAALRTGCIP
   421  DVQADEDALA QQFEQPDPAR RWREGVVKSS FTYLLLDPRE TQDLPARAFS LTPAERLQTF
   481  IRAIFYVGKG TRARPYVHLW EALGHHGRSR KQPHQACPKV RQILDIWASG CGVVSLHCFQ
   541  HVVAVEAYTR EACIVEALGI QTLTNQKQGH CYGVVAGWPP ARRRRLGVHL LHRALLVFLA
   601  EGERQLHPQD IQARG

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against ANKLE1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Intracellular
Secreted
No
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.43
Highest tissue expression
23 nTPM

Expression across tissuesHPA

Tissue

  • bone marrow: 23 nTPM
  • cerebellum: 4.4 nTPM
  • lymph node: 3.5 nTPM
  • tonsil: 2.9 nTPM
  • spleen: 2.4 nTPM
  • retina: 2.1 nTPM

Single-cell type

  • erythrocyte progenitors: 35 nCPM
  • megakaryocyte-erythroid progenitors: 15 nCPM
  • erythrocytes: 14 nCPM
  • megakaryocytes: 12 nCPM
  • megakaryocyte progenitors: 12 nCPM
  • monocyte progenitors: 6 nCPM

Immune cell

  • intermediate monocyte: 1.9 nTPM
  • memory B-cell: 1.5 nTPM
  • non-classical monocyte: 1.4 nTPM
  • myeloid DC: 1.1 nTPM
  • classical monocyte: 0.8 nTPM
  • naive B-cell: 0.8 nTPM

Brain region

  • cerebellum: 32 nTPM
  • cerebral cortex: 25 nTPM
  • amygdala: 23 nTPM
  • hypothalamus: 22 nTPM
  • basal ganglia: 21 nTPM
  • hippocampal formation: 21 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.44
gnomAD pLI
0
gnomAD missense Z
0.86
DepMap mean gene effect
-0.13
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of ANKLE1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads ANKLE1 as an antibody target. Whether an autoantibody or antibody against ANKLE1 could matter depends on whether native ANKLE1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

ANKLE1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label ANKLE1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/ANKLE1. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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