AKAP17A
A-kinase anchor protein 17A
Also known as: 721P, AK17A_HUMAN, CCDC133, CXYorf3, DXYS155E, MGC39904, SFRS17A, XE7, XE7Y
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q02040
- Gene
- AKAP17A
- Ensembl
- ENSG00000197976
- Chromosome
- X
- Canonical length
- 695 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Nuclear speckles,Cytosol
OverviewNCBI Gene
This locus encodes a protein kinase A anchoring protein. The encoded protein is part of the spliceosome complex and is involved in the regulation of alternate splicing in some mRNA precursors. Alternatively spliced transcript variants have been identified for this gene.[provided by RefSeq, Sep 2010]
Canonical amino-acid sequenceUniProt
695 residues, UniProt reviewed canonical sequence.
>Q02040|AKAP17A
1 MAAATIVHDT SEAVELCPAY GLYLKPITKM TISVALPQLK QPGKSISNWE VMERLKGMVQ
61 NHQFSTLRIS KSTMDFIRFE GEVENKSLVK SFLACLDGKT IKLSGFSDIL KVRAAEFKID
121 FPTRHDWDSF FRDAKDMNET LPGERPDTIH LEGLPCKWFA LKESGSEKPS EDVLVKVFEK
181 FGEIRNVDIP MLDPYREEMT GRNFHTFSFG GHLNFEAYVQ YREYMGFIQA MSALRGMKLM
241 YKGEDGKAVA CNIKVSFDST KHLSDASIKK RQLERQKLQE LEQQREEQKR REKEAEERQR
301 AEERKQKELE ELERERKREE KLRKREQKQR DRELRRNQKK LEKLQAEEQK QLQEKIKLEE
361 RKLLLAQRNL QSIRLIAELL SRAKAVKLRE QEQKEEKLRL QQQEERRRLQ EAELRRVEEE
421 KERALGLQRK ERELRERLLS ILLSKKPDDS HTHDELGVAH ADLLQPVLDI LQTVSSGCVS
481 ATTLHPLGGQ PPAGAPKESP AHPEADGAPK SVNGSVAEEA PCKEVQSSCR VVPEDGSPEK
541 RCPGGVLSCI PDNNQQPKGI PACEQNVSRK DTRSEQDKCN REPSKGRGRA TGDGLADRHK
601 RERSRARRAS SREDGRPRKE RRPHKKHAYK DDSPRRRSTS PDHTRSRRSH SKDRHRRERS
661 RERRGSASRK HSRHRRRSER SRSRSPSRHR STWNRLocalizationUniProt · AlphaFold · HPA
Whether an antibody against AKAP17A can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.5
- Highest tissue expression
- 82 nTPM
Expression across tissuesHPA
Tissue
- spleen: 82 nTPM
- ovary: 72 nTPM
- liver: 70 nTPM
- pancreas: 67 nTPM
- thyroid gland: 62 nTPM
- lung: 51 nTPM
Single-cell type
- epididymal principal cells: 114 nCPM
- syncytiotrophoblasts: 101 nCPM
- neutrophils: 89 nCPM
- innate lymphoid cells: 75 nCPM
- plasma cells: 65 nCPM
- pdcs: 62 nCPM
Immune cell
- basophil: 4.5 nTPM
- neutrophil: 1.9 nTPM
- eosinophil: 0.9 nTPM
- memory B-cell: 0.9 nTPM
- plasmacytoid DC: 0.8 nTPM
- memory CD8 T-cell: 0.7 nTPM
Brain region
- white matter: 38 nTPM
- cerebral cortex: 31 nTPM
- medulla oblongata: 31 nTPM
- thalamus: 30 nTPM
- choroid plexus: 28 nTPM
- basal ganglia: 27 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about AKAP17A.
Disease | ImmuneIEDB
Conditions an epitope on AKAP17A was assayed in.
- glioblastoma T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.52
- gnomAD pLI
- 0.5
- gnomAD missense Z
- 0.28
OntologyGO
Biological processes
- B cell activation
- mRNA processing
- regulation of DNA-templated transcription
- regulation of RNA splicing
- RNA splicing
- signal transduction
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- RNA-binding domain superfamily
- A-kinase anchor protein 17A/B
- AKAP-17A-like, RNA-binding domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of AKAP17A in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
- RI
- ZRANB2
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads AKAP17A as an antibody target. Whether an autoantibody or antibody against AKAP17A could matter depends on whether native AKAP17A is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
AKAP17A is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label AKAP17A as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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