ADAM23
Disintegrin and metalloproteinase domain-containing protein 23
Also known as: ADA23_HUMAN, MDC3
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O75077
- Gene
- ADAM23
- Ensembl
- ENSG00000114948
- Chromosome
- 2
- Canonical length
- 832 aa
- Protein class
- Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins
- Secretome location
- Secreted in brain
OverviewNCBI Gene
This gene encodes a member of the ADAM (a disintegrin and metalloprotease domain) family. Members of this family are membrane-anchored proteins structurally related to snake venom disintegrins and have been implicated in a variety of biological processes involving cell-cell and cell-matrix interactions, including fertilization, muscle development, and neurogenesis. It is reported that inactivation of this gene is associated with tumorigenesis in human cancers. [provided by RefSeq, May 2013]
Canonical amino-acid sequenceUniProt
832 residues, UniProt reviewed canonical sequence.
>O75077|ADAM23
1 MKPPGSSSRQ PPLAGCSLAG ASCGPQRGPA GSVPASAPAR TPPCRLLLVL LLLPPLAASS
61 RPRAWGAAAP SAPHWNETAE KNLGVLADED NTLQQNSSSN ISYSNAMQKE ITLPSRLIYY
121 INQDSESPYH VLDTKARHQQ KHNKAVHLAQ ASFQIEAFGS KFILDLILNN GLLSSDYVEI
181 HYENGKPQYS KGGEHCYYHG SIRGVKDSKV ALSTCNGLHG MFEDDTFVYM IEPLELVHDE
241 KSTGRPHIIQ KTLAGQYSKQ MKNLTMERGD QWPFLSELQW LKRRKRAVNP SRGIFEEMKY
301 LELMIVNDHK TYKKHRSSHA HTNNFAKSVV NLVDSIYKEQ LNTRVVLVAV ETWTEKDQID
361 ITTNPVQMLH EFSKYRQRIK QHADAVHLIS RVTFHYKRSS LSYFGGVCSR TRGVGVNEYG
421 LPMAVAQVLS QSLAQNLGIQ WEPSSRKPKC DCTESWGGCI MEETGVSHSR KFSKCSILEY
481 RDFLQRGGGA CLFNRPTKLF EPTECGNGYV EAGEECDCGF HVECYGLCCK KCSLSNGAHC
541 SDGPCCNNTS CLFQPRGYEC RDAVNECDIT EYCTGDSGQC PPNLHKQDGY ACNQNQGRCY
601 NGECKTRDNQ CQYIWGTKAA GSDKFCYEKL NTEGTEKGNC GKDGDRWIQC SKHDVFCGFL
661 LCTNLTRAPR IGQLQGEIIP TSFYHQGRVI DCSGAHVVLD DDTDVGYVED GTPCGPSMMC
721 LDRKCLQIQA LNMSSCPLDS KGKVCSGHGV CSNEATCICD FTWAGTDCSI RDPVRNLHPP
781 KDEGPKGPSA TNLIIGSIAG AILVAAIVLG GTGWGFKNVK KRRFDPTQQG PILocalizationUniProt · AlphaFold · HPA
Whether an antibody against ADAM23 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.34
- Highest tissue expression
- 78 nTPM
Expression across tissuesHPA
Tissue
- parathyroid gland: 78 nTPM
- cerebral cortex: 32 nTPM
- basal ganglia: 31 nTPM
- heart muscle: 29 nTPM
- choroid plexus: 17 nTPM
- cerebellum: 17 nTPM
Single-cell type
- retinal ganglion cells: 502 nCPM
- brain inhibitory neurons: 435 nCPM
- brain excitatory neurons: 344 nCPM
- retinal bipolar cells: 295 nCPM
- other brain neurons: 246 nCPM
- schwann cells: 198 nCPM
Immune cell
- memory CD4 T-cell: 2.1 nTPM
- naive B-cell: 0.1 nTPM
- total PBMC: 0.1 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
Brain region
- cerebral cortex: 128 nTPM
- white matter: 82 nTPM
- basal ganglia: 75 nTPM
- thalamus: 69 nTPM
- pons: 63 nTPM
- medulla oblongata: 63 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.28
- gnomAD pLI
- 1
- gnomAD missense Z
- 1.9
- DepMap mean gene effect
- 0.01
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell adhesion
- cellular response to leukemia inhibitory factor
- central nervous system development
- proteolysis
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- EGF-like domain
- Peptidase M12B, ADAM/reprolysin
- Disintegrin domain
- Peptidase M12B, propeptide
- ADAM, cysteine-rich domain
- Epidermal growth factor-like domain, extracellular
- Metallopeptidase, catalytic domain superfamily
- Reprolysin domain, adamalysin-type
- Disintegrin domain superfamily
- Disintegrin
- Reprolysin (M12B) family zinc metalloprotease
- Reprolysin family propeptide
- EGF-like domain
- ADAM cysteine-rich
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads ADAM23 as an antibody target. Whether an autoantibody or antibody against ADAM23 could matter depends on whether native ADAM23 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
ADAM23 is annotated at the cell surface, where native ADAM23 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label ADAM23 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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