Seroatlas · Human Serome Atlas

ACAA2

3-ketoacyl-CoA thiolase, mitochondrial

Also known as: DSAEC, THIM_HUMAN

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
P42765
Gene
ACAA2
Ensembl
ENSG00000167315
Chromosome
18
Canonical length
397 aa
Protein class
Enzymes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
Subcellular location
Nuclear bodies,Mitochondria,Basal body
Quaternary structure
Homotetramer

OverviewNCBI Gene

The encoded protein catalyzes the last step of the mitochondrial fatty acid beta-oxidation spiral. Unlike most mitochondrial matrix proteins, it contains a non-cleavable amino-terminal targeting signal. [provided by RefSeq, Jul 2008]

Canonical amino-acid sequenceUniProt

397 residues, UniProt reviewed canonical sequence.

>P42765|ACAA2
     1  MALLRGVFVV AAKRTPFGAY GGLLKDFTAT DLSEFAAKAA LSAGKVSPET VDSVIMGNVL
    61  QSSSDAIYLA RHVGLRVGIP KETPALTINR LCGSGFQSIV NGCQEICVKE AEVVLCGGTE
   121  SMSQAPYCVR NVRFGTKLGS DIKLEDSLWV SLTDQHVQLP MAMTAENLAV KHKISREECD
   181  KYALQSQQRW KAANDAGYFN DEMAPIEVKT KKGKQTMQVD EHARPQTTLE QLQKLPPVFK
   241  KDGTVTAGNA SGVADGAGAV IIASEDAVKK HNFTPLARIV GYFVSGCDPS IMGIGPVPAI
   301  SGALKKAGLS LKDMDLVEVN EAFAPQYLAV ERSLDLDISK TNVNGGAIAL GHPLGGSGSR
   361  ITAHLVHELR RRGGKYAVGS ACIGGGQGIA VIIQSTA

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against ACAA2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Intracellular
Secreted
No
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.21
Highest tissue expression
946 nTPM

Expression across tissuesHPA

Tissue

  • liver: 946 nTPM
  • kidney: 353 nTPM
  • tongue: 221 nTPM
  • heart muscle: 212 nTPM
  • skeletal muscle: 161 nTPM
  • duodenum: 160 nTPM

Single-cell type

  • hepatocytes: 854 nCPM
  • colonocytes: 298 nCPM
  • late spermatids: 266 nCPM
  • cholangiocytes: 249 nCPM
  • enterocytes: 199 nCPM
  • enteric transient amplifying cells: 170 nCPM

Immune cell

  • MAIT T-cell: 123 nTPM
  • NK-cell: 120 nTPM
  • total PBMC: 113 nTPM
  • non-classical monocyte: 109 nTPM
  • intermediate monocyte: 107 nTPM
  • myeloid DC: 103 nTPM

Brain region

  • choroid plexus: 62 nTPM
  • medulla oblongata: 56 nTPM
  • thalamus: 55 nTPM
  • basal ganglia: 54 nTPM
  • white matter: 52 nTPM
  • cerebellum: 52 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.31
gnomAD pLI
0
gnomAD missense Z
-0.27
DepMap mean gene effect
0.08
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of ACAA2 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads ACAA2 as an antibody target. Whether an autoantibody or antibody against ACAA2 could matter depends on whether native ACAA2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

ACAA2 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label ACAA2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/ACAA2. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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