TXNDC15
Thioredoxin domain-containing protein 15
Also known as: 2310047H23Rik, C5orf14, FLJ22625, TXD15_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q96J42
- Gene
- TXNDC15
- Ensembl
- ENSG00000113621
- Chromosome
- 5
- Canonical length
- 360 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Golgi apparatus
OverviewNCBI Gene
This gene encodes a member of the thioredoxin superfamily. Members of this family are characterized by a conserved active motif called the thioredoxin fold that catalyzes disulfide bond formation and isomerization. [provided by RefSeq, Apr 2017]
Canonical amino-acid sequenceUniProt
360 residues, UniProt reviewed canonical sequence.
>Q96J42|TXNDC15
1 MVPAAGRRPP RVMRLLGWWQ VLLWVLGLPV RGVEVAEESG RLWSEEQPAH PLQVGAVYLG
61 EEELLHDPMG QDRAAEEANA VLGLDTQGDH MVMLSVIPGE AEDKVSSEPS GVTCGAGGAE
121 DSRCNVRESL FSLDGAGAHF PDREEEYYTE PEVAESDAAP TEDSNNTESL KSPKVNCEER
181 NITGLENFTL KILNMSQDLM DFLNPNGSDC TLVLFYTPWC RFSASLAPHF NSLPRAFPAL
241 HFLALDASQH SSLSTRFGTV AVPNILLFQG AKPMARFNHT DRTLETLKIF IFNQTGIEAK
301 KNVVVTQADQ IGPLPSTLIK SVDWLLVFSL FFLISFIMYA TIRTESIRWL IPGQEQEHVELocalizationUniProt · AlphaFold · HPA
Whether an antibody against TXNDC15 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.53
- Highest tissue expression
- 89 nTPM
Expression across tissuesHPA
Tissue
- choroid plexus: 89 nTPM
- thyroid gland: 56 nTPM
- blood vessel: 54 nTPM
- epididymis: 53 nTPM
- pituitary gland: 48 nTPM
- pancreas: 47 nTPM
Single-cell type
- plasma cells: 284 nCPM
- decidual stromal cells: 120 nCPM
- retinal horizontal cells: 118 nCPM
- retinal pigment epithelial cells: 85 nCPM
- differentiating spermatogonia: 84 nCPM
- epididymal principal cells: 81 nCPM
Immune cell
- classical monocyte: 35 nTPM
- non-classical monocyte: 34 nTPM
- intermediate monocyte: 34 nTPM
- basophil: 33 nTPM
- MAIT T-cell: 33 nTPM
- memory CD8 T-cell: 33 nTPM
Brain region
- choroid plexus: 84 nTPM
- medulla oblongata: 56 nTPM
- hypothalamus: 52 nTPM
- white matter: 51 nTPM
- basal ganglia: 49 nTPM
- cerebellum: 49 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about TXNDC15.
Disease | AllUniProt
Conditions TXNDC15 is implicated in, by any mechanism.
- Meckel syndrome 14 (MKS14) MIM:619879
Disease | GeneticClinVar
8 pathogenic / likely-pathogenic of 91 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.76
- gnomAD pLI
- 0.01
- gnomAD missense Z
- 0.56
- DepMap mean gene effect
- -0.09
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Thioredoxin domain
- Thioredoxin-like superfamily
- Thioredoxin
- Thioredoxin domain-containing protein 15
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TXNDC15 as an antibody target. Whether an autoantibody or antibody against TXNDC15 could matter depends on whether native TXNDC15 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TXNDC15 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label TXNDC15 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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