TNNI1
Troponin I, slow skeletal muscle
Also known as: TNNI1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P19237
- Gene
- TNNI1
- Ensembl
- ENSG00000159173
- Chromosome
- 1
- Canonical length
- 187 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Nucleoli
OverviewNCBI Gene
Troponin proteins associate with tropomyosin and regulate the calcium sensitivity of the myofibril contractile apparatus of striated muscles. Troponin I (TnI), along with troponin T (TnT) and troponin C (TnC), is one of 3 subunits that form the troponin complex of the thin filaments of striated muscle. TnI is the inhibitory subunit; blocking actin-myosin interactions and thereby mediating striated muscle relaxation. The TnI subfamily contains three genes: TnI-skeletal-fast-twitch, TnI-skeletal-slow-twitch, and TnI-cardiac. The TnI-fast and TnI-slow genes are expressed in fast-twitch and slow-twitch skeletal muscle fibers, respectively, while the TnI-cardiac gene is expressed exclusively in cardiac muscle tissue. This gene encodes the Troponin-I-skeletal-slow-twitch protein. This gene is expressed in cardiac and skeletal muscle during early development but is restricted to slow-twitch skeletal muscle fibers in adults. The encoded protein prevents muscle contraction by inhibiting calcium-mediated conformational changes in actin-myosin complexes. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
187 residues, UniProt reviewed canonical sequence.
>P19237|TNNI1
1 MPEVERKPKI TASRKLLLKS LMLAKAKECW EQEHEEREAE KVRYLAERIP TLQTRGLSLS
61 ALQDLCRELH AKVEVVDEER YDIEAKCLHN TREIKDLKLK VMDLRGKFKR PPLRRVRVSA
121 DAMLRALLGS KHKVSMDLRA NLKSVKKEDT EKERPVEVGD WRKNVEAMSG MEGRKKMFDA
181 AKSPTSQLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TNNI1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.57
- Highest tissue expression
- 11,781 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 11,781 nTPM
- tongue: 2,948 nTPM
- esophagus: 183 nTPM
- heart muscle: 92 nTPM
- prostate: 80 nTPM
- salivary gland: 56 nTPM
Single-cell type
- myonuclei: 739 nCPM
- tuft cells: 69 nCPM
- thymic myoid cells: 42 nCPM
- myosatellite cells: 38 nCPM
- fibro-adipogenic progenitors: 34 nCPM
- podocytes: 18 nCPM
Immune cell
- basophil: 0.1 nTPM
- neutrophil: 0.1 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
Brain region
- hypothalamus: 0.5 nTPM
- medulla oblongata: 0.5 nTPM
- white matter: 0.5 nTPM
- cerebellum: 0.4 nTPM
- pons: 0.4 nTPM
- thalamus: 0.4 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.2
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.65
- DepMap mean gene effect
- -0.1
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cardiac muscle contraction
- regulation of striated muscle contraction
- skeletal muscle contraction
- transition between fast and slow fiber
- ventricular cardiac muscle tissue morphogenesis
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TNNI1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TNNI1 as an antibody target. Whether an autoantibody or antibody against TNNI1 could matter depends on whether native TNNI1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TNNI1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label TNNI1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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