TIMP2
Metalloproteinase inhibitor 2
Also known as: CSC-21K, TIMP2_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P16035
- Gene
- TIMP2
- Ensembl
- ENSG00000035862
- Chromosome
- 17
- Canonical length
- 220 aa
- Protein class
- Cancer-related genes, Candidate cardiovascular disease genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
- Secretome location
- Secreted to extracellular matrix
OverviewNCBI Gene
This gene is a member of the TIMP gene family. The proteins encoded by this gene family are natural inhibitors of the matrix metalloproteinases, a group of peptidases involved in degradation of the extracellular matrix. In addition to an inhibitory role against metalloproteinases, the encoded protein has a unique role among TIMP family members in its ability to directly suppress the proliferation of endothelial cells. As a result, the encoded protein may be critical to the maintenance of tissue homeostasis by suppressing the proliferation of quiescent tissues in response to angiogenic factors, and by inhibiting protease activity in tissues undergoing remodelling of the extracellular matrix. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
220 residues, UniProt reviewed canonical sequence.
>P16035|TIMP2
1 MGAAARTLRL ALGLLLLATL LRPADACSCS PVHPQQAFCN ADVVIRAKAV SEKEVDSGND
61 IYGNPIKRIQ YEIKQIKMFK GPEKDIEFIY TAPSSAVCGV SLDVGGKKEY LIAGKAEGDG
121 KMHITLCDFI VPWDTLSTTQ KKSLNHRYQM GCECKITRCP MIPCYISSPD ECLWMDWVTE
181 KNINGHQAKF FACIKRSDGS CAWYRGAAPP KQEFLDIEDPLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TIMP2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.33
- Highest tissue expression
- 934 nTPM
Expression across tissuesHPA
Tissue
- blood vessel: 934 nTPM
- ovary: 891 nTPM
- cervix: 500 nTPM
- endometrium: 448 nTPM
- adipose tissue: 442 nTPM
- gallbladder: 373 nTPM
Single-cell type
- peritubular myoid cells: 828 nCPM
- neutrophils: 739 nCPM
- late spermatids: 684 nCPM
- fibroblasts: 500 nCPM
- hofbauer cells: 429 nCPM
- melanocytes: 404 nCPM
Immune cell
- neutrophil: 14 nTPM
- eosinophil: 8.9 nTPM
- classical monocyte: 5.1 nTPM
- non-classical monocyte: 4.4 nTPM
- intermediate monocyte: 3.7 nTPM
- myeloid DC: 2.3 nTPM
Brain region
- hypothalamus: 335 nTPM
- amygdala: 318 nTPM
- white matter: 312 nTPM
- midbrain: 308 nTPM
- pons: 291 nTPM
- thalamus: 262 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.5
- gnomAD pLI
- 0.79
- gnomAD missense Z
- 1.61
- DepMap mean gene effect
- -0.03
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- negative regulation of membrane protein ectodomain proteolysis
- negative regulation of metallopeptidase activity
- response to cytokine
- response to hormone
Molecular functions
- metalloendopeptidase inhibitor activity
- molecular function inhibitor activity
- peptidase inhibitor activity
- protease binding
- zinc ion binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TIMP2 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TIMP2 as an antibody target. Whether an autoantibody or antibody against TIMP2 could matter depends on whether native TIMP2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TIMP2 is annotated as secreted, so native TIMP2 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label TIMP2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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