TFR2
Transferrin receptor protein 2
Also known as: HFE3, TFR2_HUMAN, TFRC2
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9UP52
- Gene
- TFR2
- Ensembl
- ENSG00000106327
- Chromosome
- 7
- Canonical length
- 801 aa
- Protein class
- Disease related genes, Enzymes, FDA approved drug targets, Human disease related genes, Plasma proteins, Predicted membrane proteins, Transporters
- Subcellular location
- Golgi apparatus
- Quaternary structure
- Homodimer
OverviewNCBI Gene
This gene encodes a single-pass type II membrane protein, which is a member of the transferrin receptor-like family. This protein mediates cellular uptake of transferrin-bound iron, and may be involved in iron metabolism, hepatocyte function and erythrocyte differentiation. Mutations in this gene have been associated with hereditary hemochromatosis type III. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, May 2011]
Canonical amino-acid sequenceUniProt
801 residues, UniProt reviewed canonical sequence.
>Q9UP52|TFR2
1 MERLWGLFQR AQQLSPRSSQ TVYQRVEGPR KGHLEEEEED GEEGAETLAH FCPMELRGPE
61 PLGSRPRQPN LIPWAAAGRR AAPYLVLTAL LIFTGAFLLG YVAFRGSCQA CGDSVLVVSE
121 DVNYEPDLDF HQGRLYWSDL QAMFLQFLGE GRLEDTIRQT SLRERVAGSA GMAALTQDIR
181 AALSRQKLDH VWTDTHYVGL QFPDPAHPNT LHWVDEAGKV GEQLPLEDPD VYCPYSAIGN
241 VTGELVYAHY GRPEDLQDLR ARGVDPVGRL LLVRVGVISF AQKVTNAQDF GAQGVLIYPE
301 PADFSQDPPK PSLSSQQAVY GHVHLGTGDP YTPGFPSFNQ TQFPPVASSG LPSIPAQPIS
361 ADIASRLLRK LKGPVAPQEW QGSLLGSPYH LGPGPRLRLV VNNHRTSTPI NNIFGCIEGR
421 SEPDHYVVIG AQRDAWGPGA AKSAVGTAIL LELVRTFSSM VSNGFRPRRS LLFISWDGGD
481 FGSVGSTEWL EGYLSVLHLK AVVYVSLDNA VLGDDKFHAK TSPLLTSLIE SVLKQVDSPN
541 HSGQTLYEQV VFTNPSWDAE VIRPLPMDSS AYSFTAFVGV PAVEFSFMED DQAYPFLHTK
601 EDTYENLHKV LQGRLPAVAQ AVAQLAGQLL IRLSHDRLLP LDFGRYGDVV LRHIGNLNEF
661 SGDLKARGLT LQWVYSARGD YIRAAEKLRQ EIYSSEERDE RLTRMYNVRI MRVEFYFLSQ
721 YVSPADSPFR HIFMGRGDHT LGALLDHLRL LRSNSSGTPG ATSSTGFQES RFRRQLALLT
781 WTLQGAANAL SGDVWNIDNN FLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TFR2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.28
- Highest tissue expression
- 314 nTPM
Expression across tissuesHPA
Tissue
- liver: 314 nTPM
- bone marrow: 21 nTPM
- stomach: 5.8 nTPM
- cerebellum: 3.1 nTPM
- gallbladder: 1.1 nTPM
- spleen: 0.7 nTPM
Single-cell type
- hepatocytes: 531 nCPM
- erythrocyte progenitors: 236 nCPM
- megakaryocyte-erythroid progenitors: 126 nCPM
- early spermatids: 68 nCPM
- parietal cells: 48 nCPM
- megakaryocyte progenitors: 41 nCPM
Immune cell
- basophil: 2.5 nTPM
- eosinophil: 1.9 nTPM
- classical monocyte: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- cerebellum: 1.9 nTPM
- cerebral cortex: 1.1 nTPM
- white matter: 1 nTPM
- hippocampal formation: 0.8 nTPM
- amygdala: 0.7 nTPM
- basal ganglia: 0.7 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about TFR2.
Disease | AllUniProt
Conditions TFR2 is implicated in, by any mechanism.
- Hemochromatosis 3 (HFE3) MIM:604250
Disease | GeneticClinVar
177 pathogenic / likely-pathogenic of 1,185 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Hemochromatosis type 3
- Hereditary hemochromatosis
- TFR2-related disorder
- Hemochromatosis type 1
- Ovarian serous cystadenocarcinoma
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.77
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.15
- DepMap mean gene effect
- -0.06
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to iron ion
- intracellular iron ion homeostasis
- iron ion transport
- multicellular organismal-level iron ion homeostasis
- positive regulation of endocytosis
- positive regulation of peptide hormone secretion
- positive regulation of transcription by RNA polymerase II
- receptor-mediated endocytosis
- response to iron ion
- transferrin transport
- endocytic iron import into cell
- positive regulation of protein maturation
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TFR2 as an antibody target. Whether an autoantibody or antibody against TFR2 could matter depends on whether native TFR2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TFR2 is annotated at the cell surface, where native TFR2 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label TFR2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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