RASGEF1B
Ras-GEF domain-containing family member 1B
Also known as: FLJ31695, GPIG4, RGF1B_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q0VAM2
- Gene
- RASGEF1B
- Ensembl
- ENSG00000138670
- Chromosome
- 4
- Canonical length
- 473 aa
- Protein class
- Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Nucleoplasm,Vesicles
OverviewNCBI Gene
Enables guanyl-nucleotide exchange factor activity. Predicted to be involved in Ras protein signal transduction. Predicted to be located in early endosome; late endosome; and midbody. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jul 2025]
Canonical amino-acid sequenceUniProt
473 residues, UniProt reviewed canonical sequence.
>Q0VAM2|RASGEF1B
1 MPQTPPFSAM FDSSGYNRNL YQSAEDSCGG LYYHDNNLLS GSLEALIQHL VPNVDYYPDR
61 TYIFTFLLSS RLFMHPYELM AKVCHLCVEH QRLSDPDSDK NQMRKIAPKI LQLLTEWTET
121 FPYDFRDERM MRNLKDLAHR IASGEEQTYR KNVQQMMQCL IRKLAALSQY EEVLAKISST
181 STDRLTVLKT KPQSIQRDII TVCNDPYTLA QQLTHIELER LNYIGPEEFV QAFVQKDPLD
241 NDKSCYSERK KTRNLEAYVE WFNRLSYLVA TEICMPVKKK HRARMIEYFI DVARECFNIG
301 NFNSLMAIIS GMNMSPVSRL KKTWAKVKTA KFDILEHQMD PSSNFYNYRT ALRGAAQRSL
361 TAHSSREKIV IPFFSLLIKD IYFLNEGCAN RLPNGHVNFE KFWELAKQVS EFMTWKQVEC
421 PFERDRKILQ YLLTVPVFSE DALYLASYES EGPENHIEKD RWKSLRSSLL GRVLocalizationUniProt · AlphaFold · HPA
Whether an antibody against RASGEF1B can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.27
- Highest tissue expression
- 39 nTPM
Expression across tissuesHPA
Tissue
- liver: 39 nTPM
- bone marrow: 31 nTPM
- skin: 23 nTPM
- lung: 18 nTPM
- stomach: 14 nTPM
- thymus: 13 nTPM
Single-cell type
- esophageal apical cells: 1,489 nCPM
- kupffer cells: 1,407 nCPM
- hepatocytes: 1,071 nCPM
- late spermatids: 845 nCPM
- monocytes: 831 nCPM
- neutrophil progenitors: 680 nCPM
Immune cell
- plasmacytoid DC: 28 nTPM
- non-classical monocyte: 21 nTPM
- naive B-cell: 12 nTPM
- intermediate monocyte: 12 nTPM
- memory B-cell: 9.7 nTPM
- NK-cell: 3.8 nTPM
Brain region
- pons: 84 nTPM
- medulla oblongata: 49 nTPM
- basal ganglia: 44 nTPM
- white matter: 43 nTPM
- thalamus: 43 nTPM
- choroid plexus: 38 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.35
- gnomAD pLI
- 0.92
- gnomAD missense Z
- 1.47
- DepMap mean gene effect
- -0.02
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Ras-like guanine nucleotide exchange factor, N-terminal
- Ras guanine-nucleotide exchange factors catalytic domain
- Ras-like guanine nucleotide exchange factor
- Ras guanine-nucleotide exchange factor, conserved site
- Ras guanine nucleotide exchange factor domain superfamily
- Ras guanine-nucleotide exchange factor, catalytic domain superfamily
- RasGEF domain
- RasGEF N-terminal motif
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of RASGEF1B in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads RASGEF1B as an antibody target. Whether an autoantibody or antibody against RASGEF1B could matter depends on whether native RASGEF1B is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
RASGEF1B is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label RASGEF1B as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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