PRKACB
cAMP-dependent protein kinase catalytic subunit beta
Also known as: KAPCB_HUMAN, PKACb
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P22694
- Gene
- PRKACB
- Ensembl
- ENSG00000142875
- Chromosome
- 1
- Canonical length
- 351 aa
- Protein class
- Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins, RAS pathway related proteins
- Subcellular location
- Microtubules,Cytokinetic bridge,Primary cilium,Basal body,Cytosol
OverviewNCBI Gene
The protein encoded by this gene is a member of the serine/threonine protein kinase family. The encoded protein is a catalytic subunit of cAMP (cyclic AMP)-dependent protein kinase, which mediates signalling though cAMP. cAMP signaling is important to a number of processes, including cell proliferaton and differentiation. Multiple alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Jul 2014]
Canonical amino-acid sequenceUniProt
351 residues, UniProt reviewed canonical sequence.
>P22694|PRKACB
1 MGNAATAKKG SEVESVKEFL AKAKEDFLKK WENPTQNNAG LEDFERKKTL GTGSFGRVML
61 VKHKATEQYY AMKILDKQKV VKLKQIEHTL NEKRILQAVN FPFLVRLEYA FKDNSNLYMV
121 MEYVPGGEMF SHLRRIGRFS EPHARFYAAQ IVLTFEYLHS LDLIYRDLKP ENLLIDHQGY
181 IQVTDFGFAK RVKGRTWTLC GTPEYLAPEI ILSKGYNKAV DWWALGVLIY EMAAGYPPFF
241 ADQPIQIYEK IVSGKVRFPS HFSSDLKDLL RNLLQVDLTK RFGNLKNGVS DIKTHKWFAT
301 TDWIAIYQRK VEAPFIPKFR GSGDTSNFDD YEEEDIRVSI TEKCAKEFGE FLocalizationUniProt · AlphaFold · HPA
Whether an antibody against PRKACB can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.25
- Highest tissue expression
- 179 nTPM
Expression across tissuesHPA
Tissue
- cerebral cortex: 179 nTPM
- basal ganglia: 99 nTPM
- cerebellum: 99 nTPM
- spinal cord: 96 nTPM
- hypothalamus: 96 nTPM
- salivary gland: 79 nTPM
Single-cell type
- rod photoreceptor cells: 494 nCPM
- oligodendrocytes: 493 nCPM
- megakaryocyte-erythroid progenitors: 474 nCPM
- cone photoreceptor cells: 449 nCPM
- hematopoietic stem cells: 448 nCPM
- brain inhibitory neurons: 439 nCPM
Immune cell
- NK-cell: 73 nTPM
- naive CD8 T-cell: 70 nTPM
- total PBMC: 67 nTPM
- naive CD4 T-cell: 65 nTPM
- gdT-cell: 59 nTPM
- basophil: 57 nTPM
Brain region
- hypothalamus: 310 nTPM
- white matter: 306 nTPM
- basal ganglia: 291 nTPM
- cerebral cortex: 290 nTPM
- cerebellum: 229 nTPM
- pons: 220 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about PRKACB.
Disease | AllUniProt
Conditions PRKACB is implicated in, by any mechanism.
- Cardioacrofacial dysplasia 2 (CAFD2) MIM:619143
Disease | GeneticClinVar
6 pathogenic / likely-pathogenic of 75 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Cardioacrofacial dysplasia 2
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.48
- gnomAD pLI
- 0.35
- gnomAD missense Z
- 2.8
- DepMap mean gene effect
- -0.04
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- adenylate cyclase-activating G protein-coupled receptor signaling pathway
- adenylate cyclase-modulating G protein-coupled receptor signaling pathway
- dorsal/ventral neural tube patterning
- high-density lipoprotein particle assembly
- negative regulation of smoothened signaling pathway
- negative regulation of TORC1 signaling
- neural tube closure
- positive regulation of insulin secretion
- protein phosphorylation
- regulation of protein processing
- renal water homeostasis
- signal transduction
- vascular endothelial cell response to laminar fluid shear stress
Molecular functions
- ATP binding
- cAMP-dependent protein kinase activity
- magnesium ion binding
- potassium channel inhibitor activity
- protein serine kinase activity
- protein serine/threonine kinase activity
- ubiquitin protein ligase binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of PRKACB in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads PRKACB as an antibody target. Whether an autoantibody or antibody against PRKACB could matter depends on whether native PRKACB is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
PRKACB is annotated at the cell surface, where native PRKACB is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label PRKACB as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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