PAPOLB
Poly(A) polymerase beta
Also known as: PAPOB_HUMAN, PAPT
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9NRJ5
- Gene
- PAPOLB
- Ensembl
- ENSG00000218823
- Chromosome
- 7
- Canonical length
- 637 aa
- Protein class
- Enzymes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm
OverviewNCBI Gene
Predicted to enable poly(A) RNA polymerase activity. Predicted to be involved in RNA 3'-end processing and mRNA processing. Predicted to be located in endoplasmic reticulum. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Jul 2025]
Canonical amino-acid sequenceUniProt
637 residues, UniProt reviewed canonical sequence.
>Q9NRJ5|PAPOLB
1 MMPFPVTTQG PPQPAPPPNR YGVSSPISLA VPKETDCLLT QRLIETLRPF GVFEEEEELQ
61 RRILVLEKLN NLVKEWIREI SESKSLPQSV IENVGGKIFT FGSYRLGVHT KGADIDALCV
121 APSHVDRSDF FTSFYAKLKL QEEVKDLRAV EEAFVPVIKL CFDGIEIDIL FARLALQTIP
181 EDLDLRDDSL LKNLDIRCIR SLNGCRVTDE ILHLVPNIDN FRLTLRAIKL WAKCHNIYSN
241 ILGFLGGVSW AMLVARTCQL YPNAVASTLV RKFFLVFSEW EWPNPVLLKE PEERNLNLPV
301 WDPRVNPSDR YHLMPIITPA YPQQNSTYNV SISTRMVMIE EFKQGLAITH EILLSKAEWS
361 KLFEAPSFFQ KYKHYIVLLA SASTEKQHLE WVGLVESKIR ILVGSLEKNE FITLAHVNPQ
421 SFPAPKENPD MEEFRTMWVI GLGLKKPDNS EILSIDLTYD IQSFTDTVYR QAVNSKMFEM
481 GMKITAMHLR RKELHQLLPH HVLQDKKAHS TEGRRLTDLN DSSFDLSAGC ENSMSVPSST
541 STMKTGPLIS SSQGRNSPAL AVMTASVANI QATEFSLQQV NTNESSGVAL NESIPHAVSQ
601 PAISPSPKAM VARVVSSTCL ISHPDLQETQ QQTYLILLocalizationUniProt · AlphaFold · HPA
Whether an antibody against PAPOLB can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.37
- Highest tissue expression
- 28 nTPM
Expression across tissuesHPA
Tissue
- testis: 28 nTPM
- retina: 0.2 nTPM
- adipose tissue: 0 nTPM
- adrenal gland: 0 nTPM
- amygdala: 0 nTPM
- appendix: 0 nTPM
Single-cell type
- late primary spermatocytes: 1.2 nCPM
- late spermatids: 0.8 nCPM
- early spermatids: 0.1 nCPM
- somatotrophs: 0.1 nCPM
- adipocytes: 0 nCPM
- adrenal cortex cells: 0 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- cerebellum: 3.3 nTPM
- medulla oblongata: 1.1 nTPM
- hypothalamus: 1 nTPM
- amygdala: 0.9 nTPM
- basal ganglia: 0.9 nTPM
- cerebral cortex: 0.9 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.81
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.15
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Poly(A) polymerase, RNA-binding domain
- Poly(A) polymerase, central domain
- Nucleotidyltransferase, class I-like, C-terminal
- Poly(A) polymerase
- Nucleotidyltransferase superfamily
- Poly(A) polymerase, nucleotidyltransferase domain
- Poly(A) polymerase predicted RNA binding domain
- Poly(A) polymerase central domain
- Poly(A) polymerase nucleotidyltransferase domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of PAPOLB in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads PAPOLB as an antibody target. Whether an autoantibody or antibody against PAPOLB could matter depends on whether native PAPOLB is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
PAPOLB is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label PAPOLB as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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