NLRP11
NACHT, LRR and PYD domains-containing protein 11
Also known as: CLR19.6, NAL11_HUMAN, NALP11, NOD17, PAN10, PYPAF6
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P59045
- Gene
- NLRP11
- Ensembl
- ENSG00000179873
- Chromosome
- 19
- Canonical length
- 1033 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Cytosol
OverviewNCBI Gene
This gene is a member of the the NOD-like receptor protein (NLRP) gene family and encodes a protein with an N-terminal pyrin death (PYD) domain and nucleoside triphosphate hydrolase (NACHT) domain and a C-terminal leucine-rich repeats (LRR) region. This gene has been shown to regulate caspases in the proinflammatory signal transduction pathway and, based on studies of other members of the NLRP gene family with similar domain structure, is predicted to form part of the multiprotein inflammasome complex. Alternative splicing produces multiple transcript variants encoding distince isoforms. [provided by RefSeq, May 2017]
Canonical amino-acid sequenceUniProt
1033 residues, UniProt reviewed canonical sequence.
>P59045|NLRP11
1 MAESDSTDFD LLWYLENLSD KEFQSFKKYL ARKILDFKLP QFPLIQMTKE ELANVLPISY
61 EGQYIWNMLF SIFSMMRKED LCRKIIGRRN RNQEACKAVM RRKFMLQWES HTFGKFHYKF
121 FRDVSSDVFY ILQLAYDSTS YYSANNLNVF LMGERASGKT IVINLAVLRW IKGEMWQNMI
181 SYVVHLTAHE INQMTNSSLA ELIAKDWPDG QAPIADILSD PKKLLFILED LDNIRFELNV
241 NESALCSNST QKVPIPVLLV SLLKRKMAPG CWFLISSRPT RGNNVKTFLK EVDCCTTLQL
301 SNGKREIYFN SFFKDRQRAS AALQLVHEDE ILVGLCRVAI LCWITCTVLK RQMDKGRDFQ
361 LCCQTPTDLH AHFLADALTS EAGLTANQYH LGLLKRLCLL AAGGLFLSTL NFSGEDLRCV
421 GFTEADVSVL QAANILLPSN THKDRYKFIH LNVQEFCTAI AFLMAVPNYL IPSGSREYKE
481 KREQYSDFNQ VFTFIFGLLN ANRRKILETS FGYQLPMVDS FKWYSVGYMK HLDRDPEKLT
541 HHMPLFYCLY ENREEEFVKT IVDALMEVTV YLQSDKDMMV SLYCLDYCCH LRTLKLSVQR
601 IFQNKEPLIR PTASQMKSLV YWREICSLFY TMESLRELHI FDNDLNGISE RILSKALEHS
661 SCKLRTLKLS YVSTASGFED LLKALARNRS LTYLSINCTS ISLNMFSLLH DILHEPTCQI
721 SHLSLMKCDL RASECEEIAS LLISGGSLRK LTLSSNPLRS DGMNILCDAL LHPNCTLISL
781 VLVFCCLTEN CCSALGRVLL FSPTLRQLDL CVNRLKNYGV LHVTFPLLFP TCQLEELHLS
841 GCFFSSDICQ YIAIVIATNE KLRSLEIGSN KIEDAGMQLL CGGLRHPNCM LVNIGLEECM
901 LTSACCRSLA SVLTTNKTLE RLNLLQNHLG NDGVAKLLES LISPDCVLKV VGLPLTGLNT
961 QTQQLLMTVK ERKPSLIFLS ETWSLKEGRE IGVTPASQPG SIIPNSNLDY MFFKFPRMSA
1021 AMRTSNTASR QPLLocalizationUniProt · AlphaFold · HPA
Whether an antibody against NLRP11 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.24
- Highest tissue expression
- 1.1 nTPM
Expression across tissuesHPA
Tissue
- epididymis: 1.1 nTPM
- liver: 1 nTPM
- testis: 0.7 nTPM
- tonsil: 0.6 nTPM
- ovary: 0.5 nTPM
- kidney: 0.2 nTPM
Single-cell type
- oocytes: 28 nCPM
- late primary spermatocytes: 18 nCPM
- early spermatids: 16 nCPM
- late spermatids: 8 nCPM
- undifferentiated spermatogonia: 4.7 nCPM
- cardiomyocytes: 4.4 nCPM
Immune cell
- memory B-cell: 0.1 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
Brain region
- white matter: 0.7 nTPM
- amygdala: 0.5 nTPM
- basal ganglia: 0.5 nTPM
- cerebellum: 0.5 nTPM
- cerebral cortex: 0.5 nTPM
- hippocampal formation: 0.5 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.8
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.65
- DepMap mean gene effect
- 0.01
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
- ATP binding
- RNA binding
- oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Leucine-rich repeat
- DAPIN domain
- NACHT nucleoside triphosphatase
- Death-like domain superfamily
- Copper type II, ascorbate-dependent monooxygenase, histidine-cluster-1 conserved site
- P-loop containing nucleoside triphosphate hydrolase
- Leucine-rich repeat domain superfamily
- NOD1/2, winged helix domain
- NACHT, LRR and PYD domains-containing protein, helical domain HD2
- NLRP family, innate immunity and inflammation regulators
- PAAD/DAPIN/Pyrin domain
- NACHT domain
- Leucine Rich repeat
- NLRC4 helical domain HD2
- NOD2 winged helix domain
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads NLRP11 as an antibody target. Whether an autoantibody or antibody against NLRP11 could matter depends on whether native NLRP11 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
NLRP11 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label NLRP11 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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