NKAIN2
Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 2
Also known as: FAM77B, NKAI2_HUMAN, TCBA1
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q5VXU1
- Gene
- NKAIN2
- Ensembl
- ENSG00000188580
- Chromosome
- 6
- Canonical length
- 208 aa
- Protein class
- Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
- Subcellular location
- Cytosol
OverviewNCBI Gene
This gene encodes a transmembrane protein that interacts with the beta subunit of a sodium/potassium-transporting ATPase. A chromosomal translocation involving this gene is a cause of lymphoma. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2014]
Canonical amino-acid sequenceUniProt
208 residues, UniProt reviewed canonical sequence.
>Q5VXU1|NKAIN2
1 MGYCSGRCTL IFICGMQLVC VLERQIFDFL GYQWAPILAN FVHIIIVILG LFGTIQYRPR
61 YITGYAVWLV LWVTWNVFVI CFYLEAGDLS KETDLILTFN ISMHRSWWME NGPGCTVTSV
121 TPAPDWAPED HRYITVSGCL LEYQYIEVAH SSLQIVLALA GFIYACYVVK CITEEEDSFD
181 FIGGFDSYGY QGPQKTSHLQ LQPMYMSKLocalizationUniProt · AlphaFold · HPA
Whether an antibody against NKAIN2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 4
- Mean surface accessibility (rSASA)
- 0.36
- Highest tissue expression
- 84 nTPM
Expression across tissuesHPA
Tissue
- spinal cord: 84 nTPM
- midbrain: 35 nTPM
- hippocampal formation: 31 nTPM
- cerebral cortex: 25 nTPM
- amygdala: 23 nTPM
- hypothalamus: 17 nTPM
Single-cell type
- oligodendrocytes: 2,966 nCPM
- brain excitatory neurons: 2,468 nCPM
- corticotrophs: 2,379 nCPM
- hematopoietic stem cells: 1,909 nCPM
- myonuclei: 1,355 nCPM
- retinal horizontal cells: 1,274 nCPM
Immune cell
- basophil: 1.9 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- white matter: 101 nTPM
- medulla oblongata: 72 nTPM
- spinal cord: 60 nTPM
- basal ganglia: 55 nTPM
- pons: 52 nTPM
- cerebellum: 49 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about NKAIN2.
Disease | GeneticClinVar
1 pathogenic / likely-pathogenic of 27 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- See cases
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.77
- gnomAD pLI
- 0.02
- gnomAD missense Z
- 1.02
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of NKAIN2 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads NKAIN2 as an antibody target. Whether an autoantibody or antibody against NKAIN2 could matter depends on whether native NKAIN2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
NKAIN2 is annotated at the cell surface, where native NKAIN2 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label NKAIN2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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