NAGK
N-acetyl-D-glucosamine kinase
Also known as: GNK, NAGK_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9UJ70
- Gene
- NAGK
- Ensembl
- ENSG00000124357
- Chromosome
- 2
- Canonical length
- 344 aa
- Protein class
- Enzymes, Metabolic proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
- Quaternary structure
- Homodimer
OverviewNCBI Gene
This gene encodes a member of the N-acetylhexosamine kinase family. The encoded protein catalyzes the conversion of N-acetyl-D-glucosamine to N-acetyl-D-glucosamine 6-phosphate, and is the major mammalian enzyme which recovers amino sugars. [provided by RefSeq, Nov 2011]
Canonical amino-acid sequenceUniProt
344 residues, UniProt reviewed canonical sequence.
>Q9UJ70|NAGK
1 MAAIYGGVEG GGTRSEVLLV SEDGKILAEA DGLSTNHWLI GTDKCVERIN EMVNRAKRKA
61 GVDPLVPLRS LGLSLSGGDQ EDAGRILIEE LRDRFPYLSE SYLITTDAAG SIATATPDGG
121 VVLISGTGSN CRLINPDGSE SGCGGWGHMM GDEGSAYWIA HQAVKIVFDS IDNLEAAPHD
181 IGYVKQAMFH YFQVPDRLGI LTHLYRDFDK CRFAGFCRKI AEGAQQGDPL SRYIFRKAGE
241 MLGRHIVAVL PEIDPVLFQG KIGLPILCVG SVWKSWELLK EGFLLALTQG REIQAQNFFS
301 SFTLMKLRHS SALGGASLGA RHIGHLLPMD YSANAIAFYS YTFSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against NAGK can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.23
- Highest tissue expression
- 148 nTPM
Expression across tissuesHPA
Tissue
- esophagus: 148 nTPM
- tonsil: 92 nTPM
- spleen: 82 nTPM
- parathyroid gland: 76 nTPM
- lymph node: 75 nTPM
- salivary gland: 71 nTPM
Single-cell type
- esophageal apical cells: 459 nCPM
- syncytiotrophoblasts: 343 nCPM
- esophageal suprabasal cells: 294 nCPM
- hofbauer cells: 227 nCPM
- late primary spermatocytes: 180 nCPM
- extravillous trophoblasts: 162 nCPM
Immune cell
- classical monocyte: 594 nTPM
- intermediate monocyte: 526 nTPM
- total PBMC: 465 nTPM
- myeloid DC: 392 nTPM
- non-classical monocyte: 380 nTPM
- plasmacytoid DC: 319 nTPM
Brain region
- pons: 33 nTPM
- hypothalamus: 30 nTPM
- white matter: 29 nTPM
- medulla oblongata: 27 nTPM
- midbrain: 26 nTPM
- cerebellum: 24 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.22
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.43
- DepMap mean gene effect
- 0.08
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- defense response to bacterium
- innate immune response
- N-acetylglucosamine catabolic process
- N-acetylglucosamine metabolic process
- N-acetylmannosamine metabolic process
- N-acetylneuraminate catabolic process
- positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway
- response to muramyl dipeptide
- UDP-N-acetylglucosamine biosynthetic process
Molecular functions
- ATP binding
- N-acylmannosamine kinase activity
- muramyl dipeptide kinase activity
- N-acetylglucosamine kinase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
- ATPase, nucleotide binding domain
- ATPase, BadF/BadG/BcrA/BcrD type
- N-acetyl-D-glucosamine kinase NAGK-like
- BadF/BadG/BcrA/BcrD ATPase family
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of NAGK in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads NAGK as an antibody target. Whether an autoantibody or antibody against NAGK could matter depends on whether native NAGK is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
NAGK is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label NAGK as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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