MRPL43
Large ribosomal subunit protein mL43
Also known as: bMRP36a, RM43_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q8N983
- Gene
- MRPL43
- Ensembl
- ENSG00000055950
- Chromosome
- 10
- Canonical length
- 215 aa
- Protein class
- Predicted intracellular proteins, Ribosomal proteins
- Subcellular location
- Nucleoplasm,Mitochondria
OverviewNCBI Gene
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. This gene and the gene for a semaphorin class 4 protein (SEMA4G) overlap at map location 10q24.31 and are transcribed in opposite directions. Sequence analysis identified multiple transcript variants encoding at least four different protein isoforms. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
215 residues, UniProt reviewed canonical sequence.
>Q8N983|MRPL43
1 MTARGTPSRF LASVLHNGLG RYVQQLQRLS FSVSRDGASS RGAREFVERE VIDFARRNPG
61 VVIYVNSRPC CVPRVVAEYL NGAVREESIH CKSVEEISTL VQKLADQSGL DVIRIRKPFH
121 TDNPSIQGQW HPFTNKPTTF RGLRPREVQD PAPAQDTGLR LSAVAPQILL PGWPDPPDLP
181 TVDPISSSLT SAPAPMLSAV SCLPIVPALT TVCSALocalizationUniProt · AlphaFold · HPA
Whether an antibody against MRPL43 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.5
- Highest tissue expression
- 112 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 112 nTPM
- kidney: 92 nTPM
- spinal cord: 85 nTPM
- adrenal gland: 83 nTPM
- liver: 81 nTPM
- pancreas: 74 nTPM
Single-cell type
- late primary spermatocytes: 485 nCPM
- esophageal suprabasal cells: 200 nCPM
- extravillous trophoblasts: 177 nCPM
- esophageal basal cells: 168 nCPM
- epididymal principal cells: 159 nCPM
- cytotrophoblasts: 156 nCPM
Immune cell
- basophil: 101 nTPM
- T-reg: 77 nTPM
- NK-cell: 73 nTPM
- eosinophil: 71 nTPM
- myeloid DC: 69 nTPM
- total PBMC: 68 nTPM
Brain region
- cerebellum: 53 nTPM
- white matter: 53 nTPM
- medulla oblongata: 46 nTPM
- pons: 46 nTPM
- basal ganglia: 46 nTPM
- spinal cord: 45 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.48
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.09
- DepMap mean gene effect
- -0.58
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Ribosomal protein/NADH dehydrogenase domain
- Thioredoxin-like superfamily
- Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain
- Large ribosomal subunit protein mL43
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads MRPL43 as an antibody target. Whether an autoantibody or antibody against MRPL43 could matter depends on whether native MRPL43 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
MRPL43 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label MRPL43 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...