MAT2A
S-adenosylmethionine synthase isoform type-2
Also known as: MATA2, MATII, METK2_HUMAN, SAMS2
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P31153
- Gene
- MAT2A
- Ensembl
- ENSG00000168906
- Chromosome
- 2
- Canonical length
- 395 aa
- Protein class
- Enzymes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
- Quaternary structure
- Homotetramer
OverviewNCBI Gene
The protein encoded by this gene catalyzes the production of S-adenosylmethionine (AdoMet) from methionine and ATP. AdoMet is the key methyl donor in cellular processes. [provided by RefSeq, Jun 2011]
Canonical amino-acid sequenceUniProt
395 residues, UniProt reviewed canonical sequence.
>P31153|MAT2A
1 MNGQLNGFHE AFIEEGTFLF TSESVGEGHP DKICDQISDA VLDAHLQQDP DAKVACETVA
61 KTGMILLAGE ITSRAAVDYQ KVVREAVKHI GYDDSSKGFD YKTCNVLVAL EQQSPDIAQG
121 VHLDRNEEDI GAGDQGLMFG YATDETEECM PLTIVLAHKL NAKLAELRRN GTLPWLRPDS
181 KTQVTVQYMQ DRGAVLPIRV HTIVISVQHD EEVCLDEMRD ALKEKVIKAV VPAKYLDEDT
241 IYHLQPSGRF VIGGPQGDAG LTGRKIIVDT YGGWGAHGGG AFSGKDYTKV DRSAAYAARW
301 VAKSLVKGGL CRRVLVQVSY AIGVSHPLSI SIFHYGTSQK SERELLEIVK KNFDLRPGVI
361 VRDLDLKKPI YQRTAAYGHF GRDSFPWEVP KKLKYLocalizationUniProt · AlphaFold · HPA
Whether an antibody against MAT2A can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.22
- Highest tissue expression
- 825 nTPM
Expression across tissuesHPA
Tissue
- pancreas: 825 nTPM
- thyroid gland: 363 nTPM
- pituitary gland: 274 nTPM
- skeletal muscle: 265 nTPM
- adrenal gland: 262 nTPM
- adipose tissue: 259 nTPM
Single-cell type
- smooth muscle cells: 297 nCPM
- vascular smooth muscle cells: 234 nCPM
- tuft cells: 231 nCPM
- cdc: 208 nCPM
- ocular epithelial cells: 203 nCPM
- astrocytes: 193 nCPM
Immune cell
- MAIT T-cell: 33 nTPM
- NK-cell: 27 nTPM
- intermediate monocyte: 27 nTPM
- memory CD4 T-cell: 25 nTPM
- total PBMC: 25 nTPM
- classical monocyte: 25 nTPM
Brain region
- white matter: 379 nTPM
- medulla oblongata: 264 nTPM
- basal ganglia: 257 nTPM
- midbrain: 251 nTPM
- thalamus: 249 nTPM
- cerebral cortex: 227 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about MAT2A.
Disease | GeneticClinVar
1 pathogenic / likely-pathogenic of 330 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.16
- gnomAD pLI
- 1
- gnomAD missense Z
- 3.63
- DepMap mean gene effect
- -1.73
- DepMap dependency class
- pan
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to leukemia inhibitory factor
- cellular response to methionine
- one-carbon metabolic process
- positive regulation of TORC1 signaling
- protein heterooligomerization
- protein hexamerization
- S-adenosylmethionine biosynthetic process
Molecular functions
- ATP binding
- identical protein binding
- metal ion binding
- methionine adenosyltransferase activity
- small molecule binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- S-adenosylmethionine synthetase
- S-adenosylmethionine synthetase, N-terminal
- S-adenosylmethionine synthetase, central domain
- S-adenosylmethionine synthetase, C-terminal
- S-adenosylmethionine synthetase, conserved site
- S-adenosylmethionine synthetase superfamily
- S-adenosylmethionine synthetase, N-terminal domain
- S-adenosylmethionine synthetase, central domain
- S-adenosylmethionine synthetase, C-terminal domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of MAT2A in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads MAT2A as an antibody target. Whether an autoantibody or antibody against MAT2A could matter depends on whether native MAT2A is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
MAT2A is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label MAT2A as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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