IGLL1
Immunoglobulin lambda-like polypeptide 1
Also known as: 14.1, CD179B, IGL5, IGLL, IGLL1_HUMAN, IGVPB
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P15814
- Gene
- IGLL1
- Ensembl
- ENSG00000128322
- Chromosome
- 22
- Canonical length
- 213 aa
- Protein class
- CD markers, Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
- Subcellular location
- Endoplasmic reticulum
- Secretome location
- Secreted to blood
OverviewNCBI Gene
The preB cell receptor is found on the surface of proB and preB cells, where it is involved in transduction of signals for cellular proliferation, differentiation from the proB cell to the preB cell stage, allelic exclusion at the Ig heavy chain gene locus, and promotion of Ig light chain gene rearrangements. The preB cell receptor is composed of a membrane-bound Ig mu heavy chain in association with a heterodimeric surrogate light chain. This gene encodes one of the surrogate light chain subunits and is a member of the immunoglobulin gene superfamily. This gene does not undergo rearrangement. Mutations in this gene can result in B cell deficiency and agammaglobulinemia, an autosomal recessive disease in which few or no gamma globulins or antibodies are made. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
213 residues, UniProt reviewed canonical sequence.
>P15814|IGLL1
1 MRPGTGQGGL EAPGEPGPNL RQRWPLLLLG LAVVTHGLLR PTAASQSRAL GPGAPGGSSR
61 SSLRSRWGRF LLQRGSWTGP RCWPRGFQSK HNSVTHVFGS GTQLTVLSQP KATPSVTLFP
121 PSSEELQANK ATLVCLMNDF YPGILTVTWK ADGTPITQGV EMTTPSKQSN NKYAASSYLS
181 LTPEQWRSRR SYSCQVMHEG STVEKTVAPA ECSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against IGLL1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.55
- Highest tissue expression
- 66 nTPM
Expression across tissuesHPA
Tissue
- bone marrow: 66 nTPM
- testis: 24 nTPM
- thymus: 9.5 nTPM
- tonsil: 2 nTPM
- lymph node: 1.5 nTPM
- spleen: 0.4 nTPM
Single-cell type
- late spermatids: 274 nCPM
- thymocytes: 116 nCPM
- early spermatids: 98 nCPM
- late primary spermatocytes: 58 nCPM
- neutrophil progenitors: 19 nCPM
- hematopoietic stem cells: 12 nCPM
Immune cell
- naive B-cell: 15 nTPM
- memory B-cell: 12 nTPM
- total PBMC: 1.8 nTPM
- plasmacytoid DC: 1.4 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
Brain region
- choroid plexus: 0.7 nTPM
- cerebellum: 0.5 nTPM
- cerebral cortex: 0.5 nTPM
- basal ganglia: 0.4 nTPM
- hippocampal formation: 0.4 nTPM
- white matter: 0.4 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about IGLL1.
Disease | AllUniProt
Conditions IGLL1 is implicated in, by any mechanism.
- Agammaglobulinemia 2, autosomal recessive (AGM2) MIM:613500
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.64
- gnomAD pLI
- 0.01
- gnomAD missense Z
- -0.3
- DepMap mean gene effect
- -0.19
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of IGLL1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads IGLL1 as an antibody target. Whether an autoantibody or antibody against IGLL1 could matter depends on whether native IGLL1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
IGLL1 is annotated as secreted, so native IGLL1 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Source-annotated serology context
The source annotations explicitly mention antibody, autoantibody, autoantigen, or autoimmune context. This is biological context, not study-specific reactivity.
- Mutations in this gene can result in B cell deficiency and agammaglobulinemia, an autosomal recessive disease in which few or no gamma globulins or antibodies are made.
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