HYAL4
Hyaluronidase-4
Also known as: HYAL4_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q2M3T9
- Gene
- HYAL4
- Ensembl
- ENSG00000106302
- Chromosome
- 7
- Canonical length
- 481 aa
- Protein class
- Enzymes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins
OverviewNCBI Gene
This gene encodes a protein which is similar in structure to hyaluronidases but lacks hyaluronidase activity. The encoded protein acts as a chondroitin-sulfate-specific endo-beta-N-acetylgalactosaminidase; that is, it exhibits hydrolytic activity toward chondroitin sulfate chains and degrades them into oligosaccharides. Proteoglycans are formed by the covalent linkage of chondroitin sulfate chains to protein. Proteoglycans are ubiquitous components of the extracellular matrix of connective tissues and are also found at the surface of many cell types where they participate in a variety of cellular processes such as cell proliferation, differentiation, migration, cell-cell recognition, extracellular matrix deposition, and tissue morphogenesis. The expression of this gene is highest in testes and placenta. [provided by RefSeq, Apr 2019]
Canonical amino-acid sequenceUniProt
481 residues, UniProt reviewed canonical sequence.
>Q2M3T9|HYAL4
1 MKVLSEGQLK LCVVQPVHLT SWLLIFFILK SISCLKPARL PIYQRKPFIA AWNAPTDQCL
61 IKYNLRLNLK MFPVIGSPLA KARGQNVTIF YVNRLGYYPW YTSQGVPING GLPQNISLQV
121 HLEKADQDIN YYIPAEDFSG LAVIDWEYWR PQWARNWNSK DVYRQKSRKL ISDMGKNVSA
181 TDIEYLAKVT FEESAKAFMK ETIKLGIKSR PKGLWGYYLY PDCHNYNVYA PNYSGSCPED
241 EVLRNNELSW LWNSSAALYP SIGVWKSLGD SENILRFSKF RVHESMRIST MTSHDYALPV
301 FVYTRLGYRD EPLFFLSKQD LVSTIGESAA LGAAGIVIWG DMNLTASKAN CTKVKQFVSS
361 DLGSYIANVT RAAEVCSLHL CRNNGRCIRK MWNAPSYLHL NPASYHIEAS EDGEFTVKGK
421 ASDTDLAVMA DTFSCHCYQG YEGADCREIK TADGCSGVSP SPGSLMTLCL LLLASYRSIQ
481 LLocalizationUniProt · AlphaFold · HPA
Whether an antibody against HYAL4 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 2
- Mean surface accessibility (rSASA)
- 0.27
- Highest tissue expression
- 3.8 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 3.8 nTPM
- placenta: 3.7 nTPM
- testis: 1.9 nTPM
- retina: 0.9 nTPM
- skin: 0.9 nTPM
- tonsil: 0.9 nTPM
Single-cell type
- myonuclei: 98 nCPM
- renal collecting duct intercalated cells: 49 nCPM
- epididymal clear cells: 43 nCPM
- extravillous trophoblasts: 34 nCPM
- cytotrophoblasts: 19 nCPM
- migrating cytotrophoblasts: 16 nCPM
Immune cell
- neutrophil: 0.6 nTPM
- naive B-cell: 0.2 nTPM
- basophil: 0.1 nTPM
- classical monocyte: 0.1 nTPM
- gdT-cell: 0.1 nTPM
- intermediate monocyte: 0.1 nTPM
Brain region
- white matter: 6.5 nTPM
- cerebellum: 6 nTPM
- cerebral cortex: 5.9 nTPM
- pons: 5.6 nTPM
- amygdala: 5.4 nTPM
- basal ganglia: 5.4 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.69
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.1
- DepMap mean gene effect
- -0.09
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- carbohydrate metabolic process
- chondroitin sulfate proteoglycan catabolic process
- glycosaminoglycan catabolic process
- hyaluronan catabolic process
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads HYAL4 as an antibody target. Whether an autoantibody or antibody against HYAL4 could matter depends on whether native HYAL4 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
HYAL4 is annotated at the cell surface, where native HYAL4 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label HYAL4 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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