GMPS
GMP synthase [glutamine-hydrolyzing]
Also known as: GATD7, GUAA_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P49915
- Gene
- GMPS
- Ensembl
- ENSG00000163655
- Chromosome
- 3
- Canonical length
- 693 aa
- Protein class
- Disease related genes, Enzymes, Metabolic proteins, Plasma proteins, Potential drug targets, Predicted intracellular proteins
- Subcellular location
- Cytosol
- Quaternary structure
- Homodimer
OverviewNCBI Gene
In the de novo synthesis of purine nucleotides, IMP is the branch point metabolite at which point the pathway diverges to the synthesis of either guanine or adenine nucleotides. In the guanine nucleotide pathway, there are 2 enzymes involved in converting IMP to GMP, namely IMP dehydrogenase (IMPD1), which catalyzes the oxidation of IMP to XMP, and GMP synthetase, which catalyzes the amination of XMP to GMP. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
693 residues, UniProt reviewed canonical sequence.
>P49915|GMPS
1 MALCNGDSKL ENAGGDLKDG HHHYEGAVVI LDAGAQYGKV IDRRVRELFV QSEIFPLETP
61 AFAIKEQGFR AIIISGGPNS VYAEDAPWFD PAIFTIGKPV LGICYGMQMM NKVFGGTVHK
121 KSVREDGVFN ISVDNTCSLF RGLQKEEVVL LTHGDSVDKV ADGFKVVARS GNIVAGIANE
181 SKKLYGAQFH PEVGLTENGK VILKNFLYDI AGCSGTFTVQ NRELECIREI KERVGTSKVL
241 VLLSGGVDST VCTALLNRAL NQEQVIAVHI DNGFMRKRES QSVEEALKKL GIQVKVINAA
301 HSFYNGTTTL PISDEDRTPR KRISKTLNMT TSPEEKRKII GDTFVKIANE VIGEMNLKPE
361 EVFLAQGTLR PDLIESASLV ASGKAELIKT HHNDTELIRK LREEGKVIEP LKDFHKDEVR
421 ILGRELGLPE ELVSRHPFPG PGLAIRVICA EEPYICKDFP ETNNILKIVA DFSASVKKPH
481 TLLQRVKACT TEEDQEKLMQ ITSLHSLNAF LLPIKTVGVQ GDCRSYSYVC GISSKDEPDW
541 ESLIFLARLI PRMCHNVNRV VYIFGPPVKE PPTDVTPTFL TTGVLSTLRQ ADFEAHNILR
601 ESGYAGKISQ MPVILTPLHF DRDPLQKQPS CQRSVVIRTF ITSDFMTGIP ATPGNEIPVE
661 VVLKMVTEIK KIPGISRIMY DLTSKPPGTT EWELocalizationUniProt · AlphaFold · HPA
Whether an antibody against GMPS can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.25
- Highest tissue expression
- 94 nTPM
Expression across tissuesHPA
Tissue
- testis: 94 nTPM
- bone marrow: 42 nTPM
- thymus: 30 nTPM
- tonsil: 28 nTPM
- lymph node: 25 nTPM
- pancreas: 25 nTPM
Single-cell type
- late primary spermatocytes: 468 nCPM
- late spermatids: 267 nCPM
- early spermatids: 229 nCPM
- erythrocyte progenitors: 177 nCPM
- sertoli cells: 135 nCPM
- monocyte progenitors: 123 nCPM
Immune cell
- non-classical monocyte: 30 nTPM
- NK-cell: 29 nTPM
- MAIT T-cell: 29 nTPM
- T-reg: 27 nTPM
- myeloid DC: 26 nTPM
- gdT-cell: 25 nTPM
Brain region
- cerebellum: 64 nTPM
- cerebral cortex: 38 nTPM
- hypothalamus: 34 nTPM
- pons: 34 nTPM
- white matter: 34 nTPM
- choroid plexus: 34 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.24
- gnomAD pLI
- 1
- gnomAD missense Z
- 2.37
- DepMap mean gene effect
- -1.02
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 15% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- GMP biosynthetic process
- purine nucleobase biosynthetic process
- purine ribonucleoside monophosphate biosynthetic process
Molecular functions
- ATP binding
- GMP synthase (glutamine-hydrolyzing) activity
- GMP synthase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Rossmann-like alpha/beta/alpha sandwich fold
- Glutamine amidotransferase
- NAD/GMP synthase
- Class I glutamine amidotransferase-like
- Glutamine amidotransferase class-I
- NAD synthase
- GMP synthase, C-terminal
- GMP synthase, glutamine amidotransferase
- GMP synthetase ATP pyrophosphatase domain
- GMP synthase C terminal domain
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads GMPS as an antibody target. Whether an autoantibody or antibody against GMPS could matter depends on whether native GMPS is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
GMPS is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label GMPS as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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