GAS7
Growth arrest-specific protein 7
Also known as: GAS7_HUMAN, KIAA0394, MGC1348
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O60861
- Gene
- GAS7
- Ensembl
- ENSG00000007237
- Chromosome
- 17
- Canonical length
- 476 aa
- Protein class
- Cancer-related genes, Disease related genes, Predicted intracellular proteins
- Subcellular location
- Plasma membrane,Actin filaments,Focal adhesion sites
OverviewNCBI Gene
Growth arrest-specific 7 is expressed primarily in terminally differentiated brain cells and predominantly in mature cerebellar Purkinje neurons. GAS7 plays a putative role in neuronal development. Several transcript variants encoding proteins which vary in the N-terminus have been described. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
476 residues, UniProt reviewed canonical sequence.
>O60861|GAS7
1 MSGARCRTLY PFSGERHGQG LRFAAGELIT LLQVPDGGWW EGEKEDGLRG WFPASYVQLL
61 EKPGMVPPPP GEESQTVILP PGWQSYLSPQ GRRYYVNTTT NETTWERPSS SPGIPASPGS
121 HRSSLPPTVN GYHASGTPAH PPETAHMSVR KSTGDSQNLG SSSPSKKQSK ENTITINCVT
181 FPHPDTMPEQ QLLKPTEWSY CDYFWADKKD PQGNGTVAGF ELLLQKQLKG KQMQKEMSEF
241 IRERIKIEED YAKNLAKLSQ NSLASQEEGS LGEAWAQVKK SLADEAEVHL KFSAKLHSEV
301 EKPLMNFREN FKKDMKKCDH HIADLRKQLA SRYASVEKAR KALTERQRDL EMKTQQLEIK
361 LSNKTEEDIK KARRKSTQAG DDLMRCVDLY NQAQSKWFEE MVTTTLELER LEVERVEMIR
421 QHLCQYTQLR HETDMFNQST VEPVDQLLRK VDPAKDRELW VREHKTGNIR PVDMEILocalizationUniProt · AlphaFold · HPA
Whether an antibody against GAS7 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.42
- Highest tissue expression
- 176 nTPM
Expression across tissuesHPA
Tissue
- cerebellum: 176 nTPM
- cerebral cortex: 87 nTPM
- spinal cord: 85 nTPM
- basal ganglia: 82 nTPM
- hippocampal formation: 56 nTPM
- midbrain: 53 nTPM
Single-cell type
- neutrophils: 740 nCPM
- fibro-adipogenic progenitors: 699 nCPM
- monocytes: 604 nCPM
- schwann cells: 526 nCPM
- macrophages: 385 nCPM
- cdc: 350 nCPM
Immune cell
- classical monocyte: 26 nTPM
- eosinophil: 17 nTPM
- neutrophil: 17 nTPM
- total PBMC: 7.7 nTPM
- intermediate monocyte: 6.9 nTPM
- myeloid DC: 5.3 nTPM
Brain region
- white matter: 285 nTPM
- cerebral cortex: 283 nTPM
- cerebellum: 274 nTPM
- basal ganglia: 259 nTPM
- thalamus: 169 nTPM
- midbrain: 168 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about GAS7.
Disease | ImmuneIEDB
Conditions an epitope on GAS7 was assayed in.
- melanoma T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.36
- gnomAD pLI
- 0.85
- gnomAD missense Z
- 2.33
- DepMap mean gene effect
- -0.04
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- FCH domain
- WW domain
- SH3 domain
- AH/BAR domain superfamily
- F-BAR domain
- WW domain superfamily
- SH3-like domain superfamily
- WW domain
- Fes/CIP4, and EFC/F-BAR homology domain
- Variant SH3 domain
- GAS7, F-BAR domain
- Unstructured linker region between on GAS7 protein
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads GAS7 as an antibody target. Whether an autoantibody or antibody against GAS7 could matter depends on whether native GAS7 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
GAS7 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label GAS7 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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