GABRP
Gamma-aminobutyric acid receptor subunit pi
Also known as: GBRP_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O00591
- Gene
- GABRP
- Ensembl
- ENSG00000094755
- Chromosome
- 5
- Canonical length
- 440 aa
- Protein class
- FDA approved drug targets, Predicted intracellular proteins, Predicted membrane proteins
OverviewNCBI Gene
The gamma-aminobutyric acid (GABA) A receptor is a multisubunit chloride channel that mediates the fastest inhibitory synaptic transmission in the central nervous system. The subunit encoded by this gene is expressed in several non-neuronal tissues including the uterus and ovaries. This subunit can assemble with known GABA A receptor subunits, and the presence of this subunit alters the sensitivity of recombinant receptors to modulatory agents such as pregnanolone. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2014]
Canonical amino-acid sequenceUniProt
440 residues, UniProt reviewed canonical sequence.
>O00591|GABRP
1 MNYSLHLAFV CLSLFTERMC IQGSQFNVEV GRSDKLSLPG FENLTAGYNK FLRPNFGGEP
61 VQIALTLDIA SISSISESNM DYTATIYLRQ RWMDQRLVFE GNKSFTLDAR LVEFLWVPDT
121 YIVESKKSFL HEVTVGNRLI RLFSNGTVLY ALRITTTVAC NMDLSKYPMD TQTCKLQLES
181 WGYDGNDVEF TWLRGNDSVR GLEHLRLAQY TIERYFTLVT RSQQETGNYT RLVLQFELRR
241 NVLYFILETY VPSTFLVVLS WVSFWISLDS VPARTCIGVT TVLSMTTLMI GSRTSLPNTN
301 CFIKAIDVYL GICFSFVFGA LLEYAVAHYS SLQQMAAKDR GTTKEVEEVS ITNIINSSIS
361 SFKRKISFAS IEISSDNVDY SDLTMKTSDK FKFVFREKMG RIVDYFTIQN PSNVDHYSKL
421 LFPLIFMLAN VFYWAYYMYFLocalizationUniProt · AlphaFold · HPA
Whether an antibody against GABRP can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 4
- Mean surface accessibility (rSASA)
- 0.36
- Highest tissue expression
- 161 nTPM
Expression across tissuesHPA
Tissue
- esophagus: 161 nTPM
- breast: 142 nTPM
- endometrium: 46 nTPM
- tonsil: 40 nTPM
- retina: 39 nTPM
- salivary gland: 34 nTPM
Single-cell type
- endometrial luminal cells: 634 nCPM
- endometrial glandular cells: 559 nCPM
- esophageal apical cells: 399 nCPM
- breast secretory cells: 361 nCPM
- salivary duct cells: 317 nCPM
- submucosal glandular cells: 184 nCPM
Immune cell
- basophil: 12 nTPM
- eosinophil: 6.2 nTPM
- non-classical monocyte: 5.8 nTPM
- neutrophil: 4.6 nTPM
- total PBMC: 2.4 nTPM
- classical monocyte: 2 nTPM
Brain region
- hypothalamus: 142 nTPM
- cerebral cortex: 132 nTPM
- white matter: 129 nTPM
- cerebellum: 125 nTPM
- medulla oblongata: 121 nTPM
- thalamus: 117 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.41
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.16
- DepMap mean gene effect
- 0.07
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Gamma-aminobutyric acid A receptor/Glycine receptor alpha
- Neurotransmitter-gated ion-channel transmembrane domain
- Neurotransmitter-gated ion-channel
- Neurotransmitter-gated ion-channel ligand-binding domain
- Neurotransmitter-gated ion-channel, conserved site
- Neurotransmitter-gated ion-channel transmembrane domain superfamily
- Neurotransmitter-gated ion-channel ligand-binding domain superfamily
- Neuronal acetylcholine receptor
- Neurotransmitter-gated ion-channel ligand binding domain
- Neurotransmitter-gated ion-channel transmembrane region
- Gamma-aminobutyric-acid A receptor pi subunit
- Gamma-aminobutyric acid receptor subunit pi, transmembrane domain
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads GABRP as an antibody target. Whether an autoantibody or antibody against GABRP could matter depends on whether native GABRP is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
GABRP is annotated at the cell surface, where native GABRP is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label GABRP as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...