FHL5
Four and a half LIM domains protein 5
Also known as: ACT, dJ393D12.2, FHL5_HUMAN, FLJ33049
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q5TD97
- Gene
- FHL5
- Ensembl
- ENSG00000112214
- Chromosome
- 6
- Canonical length
- 284 aa
- Protein class
- Predicted intracellular proteins
OverviewNCBI Gene
The protein encoded by this gene is coordinately expressed with activator of cAMP-responsive element modulator (CREM). It is associated with CREM and confers a powerful transcriptional activation function. CREM acts as a transcription factor essential for the differentiation of spermatids into mature spermatozoa. There are multiple polyadenylation sites found in this gene. Polymorphisms in this gene may be associated with susceptibility for migraine headaches. Alternative splicing results in multiple transcript variants encoding the same protein. [provided by RefSeq, Apr 2016]
Canonical amino-acid sequenceUniProt
284 residues, UniProt reviewed canonical sequence.
>Q5TD97|FHL5
1 MTTAHFYCQY CTASLLGKKY VLKDDSPYCV TCYDRVFSNY CEECKKPIES DSKDLCYKDR
61 HWHEGCFKCT KCNHSLVEKP FAAKDERLLC TECYSNECSS KCFHCKRTIM PGSRKMEFKG
121 NYWHETCFVC ENCRQPIGTK PLISKESGNY CVPCFEKEFA HYCNFCKKVI TSGGITFCDQ
181 LWHKECFLCS GCRKDLCEEQ FMSRDDYPFC VDCYNHLYAN KCVACSKPIS GLTGAKFICF
241 QDSQWHSECF NCGKCSVSLV GKGFLTQNKE IFCQKCGSGM DTDILocalizationUniProt · AlphaFold · HPA
Whether an antibody against FHL5 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.37
- Highest tissue expression
- 245 nTPM
Expression across tissuesHPA
Tissue
- blood vessel: 245 nTPM
- testis: 51 nTPM
- adipose tissue: 32 nTPM
- cervix: 23 nTPM
- epididymis: 16 nTPM
- breast: 15 nTPM
Single-cell type
- late spermatids: 1,947 nCPM
- early spermatids: 1,427 nCPM
- vascular smooth muscle cells: 415 nCPM
- late primary spermatocytes: 379 nCPM
- pericytes: 241 nCPM
- leydig cells: 134 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- basal ganglia: 11 nTPM
- pons: 8.5 nTPM
- thalamus: 8.1 nTPM
- medulla oblongata: 6.8 nTPM
- choroid plexus: 6.5 nTPM
- cerebellum: 5.6 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.61
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.31
- DepMap mean gene effect
- 0.01
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Zinc finger, LIM-type
- FHL1/2/3/5, N-terminal LIM domain
- LIM domain
- FHL2/3 N-terminal LIM domain
- FHL5, second LIM domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of FHL5 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads FHL5 as an antibody target. Whether an autoantibody or antibody against FHL5 could matter depends on whether native FHL5 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
FHL5 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label FHL5 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...