FGF18
Fibroblast growth factor 18
Also known as: FGF-18, FGF18_HUMAN, ZFGF5
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O76093
- Gene
- FGF18
- Ensembl
- ENSG00000156427
- Chromosome
- 5
- Canonical length
- 207 aa
- Protein class
- Cancer-related genes, Predicted secreted proteins, RAS pathway related proteins
- Secretome location
- Secreted in other tissues
OverviewNCBI Gene
The protein encoded by this gene is a member of the fibroblast growth factor (FGF) family. FGF family members possess broad mitogenic and cell survival activities, and are involved in a variety of biological processes, including embryonic development, cell growth, morphogenesis, tissue repair, tumor growth, and invasion. It has been shown in vitro that this protein is able to induce neurite outgrowth in PC12 cells. Studies of the similar proteins in mouse and chick suggested that this protein is a pleiotropic growth factor that stimulates proliferation in a number of tissues, most notably the liver and small intestine. Knockout studies of the similar gene in mice implied the role of this protein in regulating proliferation and differentiation of midline cerebellar structures. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
207 residues, UniProt reviewed canonical sequence.
>O76093|FGF18
1 MYSAPSACTC LCLHFLLLCF QVQVLVAEEN VDFRIHVENQ TRARDDVSRK QLRLYQLYSR
61 TSGKHIQVLG RRISARGEDG DKYAQLLVET DTFGSQVRIK GKETEFYLCM NRKGKLVGKP
121 DGTSKECVFI EKVLENNYTA LMSAKYSGWY VGFTKKGRPR KGPKTRENQQ DVHFMKRYPK
181 GQPELQKPFK YTTVTKRSRR IRPTHPALocalizationUniProt · AlphaFold · HPA
Whether an antibody against FGF18 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.36
- Highest tissue expression
- 15 nTPM
Expression across tissuesHPA
Tissue
- heart muscle: 15 nTPM
- adipose tissue: 4 nTPM
- skeletal muscle: 3.6 nTPM
- blood vessel: 2.4 nTPM
- lung: 2.4 nTPM
- breast: 2 nTPM
Single-cell type
- endometrial luminal cells: 62 nCPM
- breast myoepithelial cells: 41 nCPM
- endometrial secretory cells: 20 nCPM
- endometrial glandular cells: 20 nCPM
- fallopian secretory cells: 18 nCPM
- mesothelial cells: 17 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- cerebral cortex: 2.9 nTPM
- pons: 1.9 nTPM
- medulla oblongata: 1.7 nTPM
- thalamus: 1.7 nTPM
- midbrain: 1.3 nTPM
- basal ganglia: 1.2 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.69
- gnomAD pLI
- 0.39
- gnomAD missense Z
- 2.45
- DepMap mean gene effect
- 0.03
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- anatomical structure morphogenesis
- angiogenesis
- cell population proliferation
- cell-cell signaling
- chondrocyte development
- endochondral ossification
- ERK1 and ERK2 cascade
- fibroblast growth factor receptor signaling pathway
- intramembranous ossification
- lung development
- neurogenesis
- positive regulation of angiogenesis
- positive regulation of blood vessel endothelial cell migration
- positive regulation of cell population proliferation
- positive regulation of chondrocyte differentiation
- positive regulation of endothelial cell chemotaxis to fibroblast growth factor
- positive regulation of ERK1 and ERK2 cascade
- positive regulation of MAP kinase activity
- positive regulation of MAPK cascade
- positive regulation of vascular endothelial growth factor receptor signaling pathway
- regulation of cell migration
- signal transduction
- vascular endothelial growth factor receptor signaling pathway
Molecular functions
- growth factor activity
- type 1 fibroblast growth factor receptor binding
- type 2 fibroblast growth factor receptor binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of FGF18 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads FGF18 as an antibody target. Whether an autoantibody or antibody against FGF18 could matter depends on whether native FGF18 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
FGF18 is annotated as secreted, so native FGF18 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label FGF18 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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