Seroatlas · Human Serome Atlas

FAM229B

Protein FAM229B

Also known as: C6orf225, DKFZp586F0922, F229B_HUMAN, LOC619208

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q4G0N7
Gene
FAM229B
Ensembl
ENSG00000203778
Chromosome
6
Canonical length
80 aa
Protein class
Predicted intracellular proteins
Subcellular location
Nucleoplasm,Nucleoli,Golgi apparatus

OverviewNCBI Gene

No narrative summary is available for FAM229B in this catalog release; identity and structured annotations are shown without generated factual claims.

Canonical amino-acid sequenceUniProt

80 residues, UniProt reviewed canonical sequence.

>Q4G0N7|FAM229B
     1  MPFQFGTQPR RFPVEGGDSS IELEPGLSSS AACNGKEMSP TRQLRRCPGS HCLTITDVPV
    61  TVYATTRKPP AQSSKEMHPK

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against FAM229B can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Unknown
Secreted
No
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.69
Highest tissue expression
428 nTPM

Expression across tissuesHPA

Tissue

  • testis: 428 nTPM
  • spinal cord: 101 nTPM
  • choroid plexus: 99 nTPM
  • midbrain: 89 nTPM
  • amygdala: 75 nTPM
  • basal ganglia: 71 nTPM

Single-cell type

  • late spermatids: 10,748 nCPM
  • early spermatids: 3,604 nCPM
  • late primary spermatocytes: 2,623 nCPM
  • respiratory ciliated cells: 476 nCPM
  • epididymal efferent duct ciliated cells: 387 nCPM
  • fallopian tube ciliated cells: 385 nCPM

Immune cell

  • naive CD4 T-cell: 5.6 nTPM
  • naive CD8 T-cell: 5.1 nTPM
  • NK-cell: 4.6 nTPM
  • MAIT T-cell: 3.9 nTPM
  • gdT-cell: 3 nTPM
  • memory CD4 T-cell: 2.6 nTPM

Brain region

  • white matter: 71 nTPM
  • spinal cord: 66 nTPM
  • medulla oblongata: 63 nTPM
  • midbrain: 60 nTPM
  • hypothalamus: 57 nTPM
  • basal ganglia: 56 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.12
gnomAD pLI
0.57
gnomAD missense Z
0.18
DepMap mean gene effect
0
DepMap dependency class
none

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

Protein domainsUniProt · Pfam · InterPro

InteractionsUniProt · HPA

Protein binding partners of FAM229B in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads FAM229B as an antibody target. Whether an autoantibody or antibody against FAM229B could matter depends on whether native FAM229B is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

FAM229B is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label FAM229B as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/FAM229B. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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