Seroatlas · Human Serome Atlas

CNIH4

Protein cornichon homolog 4

Also known as: CNIH4_HUMAN, HSPC163

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q9P003
Gene
CNIH4
Ensembl
ENSG00000143771
Chromosome
1
Canonical length
139 aa
Protein class
Predicted membrane proteins

OverviewNCBI Gene

Enables CCR5 chemokine receptor binding activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Located in endoplasmic reticulum and endoplasmic reticulum-Golgi intermediate compartment. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

139 residues, UniProt reviewed canonical sequence.

>Q9P003|CNIH4
     1  MEAVVFVFSL LDCCALIFLS VYFIITLSDL ECDYINARSC CSKLNKWVIP ELIGHTIVTV
    61  LLLMSLHWFI FLLNLPVATW NIYRYIMVPS GNMGVFDPTE IHNRGQLKSH MKEAMIKLGF
   121  HLLCFFMYLY SMILALIND

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against CNIH4 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Intracellular
Secreted
No
Transmembrane segments
3
Mean surface accessibility (rSASA)
0.3
Highest tissue expression
28 nTPM

Expression across tissuesHPA

Tissue

  • choroid plexus: 28 nTPM
  • bone marrow: 25 nTPM
  • blood vessel: 24 nTPM
  • skeletal muscle: 24 nTPM
  • esophagus: 22 nTPM
  • adipose tissue: 21 nTPM

Single-cell type

  • gastric progenitor cells: 449 nCPM
  • esophageal apical cells: 311 nCPM
  • esophageal suprabasal cells: 279 nCPM
  • extravillous trophoblasts: 231 nCPM
  • esophageal basal cells: 222 nCPM
  • syncytiotrophoblasts: 195 nCPM

Immune cell

  • non-classical monocyte: 155 nTPM
  • intermediate monocyte: 107 nTPM
  • eosinophil: 73 nTPM
  • classical monocyte: 60 nTPM
  • total PBMC: 58 nTPM
  • basophil: 55 nTPM

Brain region

  • choroid plexus: 21 nTPM
  • hypothalamus: 18 nTPM
  • pons: 17 nTPM
  • medulla oblongata: 17 nTPM
  • midbrain: 16 nTPM
  • basal ganglia: 16 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1
gnomAD pLI
0.02
gnomAD missense Z
0.23
DepMap mean gene effect
-0.29
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 9% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of CNIH4 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads CNIH4 as an antibody target. Whether an autoantibody or antibody against CNIH4 could matter depends on whether native CNIH4 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

CNIH4 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label CNIH4 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/CNIH4. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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