CACNG7
Voltage-dependent calcium channel gamma-7 subunit
Also known as: CCG7_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P62955
- Gene
- CACNG7
- Ensembl
- ENSG00000105605
- Chromosome
- 19
- Canonical length
- 275 aa
- Protein class
- FDA approved drug targets, Predicted membrane proteins, Transporters
OverviewNCBI Gene
The protein encoded by this gene is a type II transmembrane AMPA receptor regulatory protein (TARP). TARPs regulate both trafficking and channel gating of the AMPA receptors. This gene is part of a functionally diverse eight-member protein subfamily of the PMP-22/EMP/MP20 family and is located in a cluster with two family members, a type I TARP and a calcium channel gamma subunit. [provided by RefSeq, Dec 2010]
Canonical amino-acid sequenceUniProt
275 residues, UniProt reviewed canonical sequence.
>P62955|CACNG7
1 MSHCSSRALT LLSSVFGACG LLLVGIAVST DYWLYMEEGT VLPQNQTTEV KMALHAGLWR
61 VCFFAGREKG RCVASEYFLE PEINLVTENT ENILKTVRTA TPFPMVSLFL VFTAFVISNI
121 GHIRPQRTIL AFVSGIFFIL SGLSLVVGLV LYISSINDEV MNRPSSSEQY FHYRYGWSFA
181 FAASSFLLKE GAGVMSVYLF TKRYAEEEMY RPHPAFYRPR LSDCSDYSGQ FLQPEAWRRG
241 RSPSDISSDV SIQMTQNYPP AIKYPDHLHI STSPCLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CACNG7 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 4
- Mean surface accessibility (rSASA)
- 0.41
- Highest tissue expression
- 79 nTPM
Expression across tissuesHPA
Tissue
- cerebral cortex: 79 nTPM
- amygdala: 64 nTPM
- cerebellum: 64 nTPM
- hippocampal formation: 60 nTPM
- midbrain: 44 nTPM
- basal ganglia: 42 nTPM
Single-cell type
- retinal horizontal cells: 441 nCPM
- retinal amacrine cells: 69 nCPM
- oligodendrocyte progenitor cells: 59 nCPM
- retinal ganglion cells: 54 nCPM
- brain inhibitory neurons: 49 nCPM
- brain excitatory neurons: 45 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- cerebral cortex: 125 nTPM
- thalamus: 115 nTPM
- white matter: 102 nTPM
- amygdala: 102 nTPM
- midbrain: 96 nTPM
- hippocampal formation: 95 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about CACNG7.
Disease | GeneticClinVar
1 pathogenic / likely-pathogenic of 36 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.41
- gnomAD pLI
- 0.89
- gnomAD missense Z
- 1.65
- DepMap mean gene effect
- 0.25
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 2% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- calcium ion transport
- neurotransmitter receptor localization to postsynaptic specialization membrane
- positive regulation of dendrite extension
- positive regulation of synaptic transmission, glutamatergic
- postsynaptic neurotransmitter receptor diffusion trapping
- regulation of AMPA receptor activity
- regulation of mRNA stability
- transmission of nerve impulse
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- PMP-22/EMP/MP20/Claudin
- Voltage-dependent calcium channel, gamma subunit
- Voltage-dependent calcium channel gamma subunit
- PMP-22/EMP/MP20/Claudin tight junction
- Voltage-dependent calcium channel, gamma-7 subunit
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CACNG7 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CACNG7 as an antibody target. Whether an autoantibody or antibody against CACNG7 could matter depends on whether native CACNG7 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CACNG7 is annotated at the cell surface, where native CACNG7 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label CACNG7 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...