APIP
Methylthioribulose-1-phosphate dehydratase
Also known as: APIP2, CGI-29, Mmrp19, MTNB_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q96GX9
- Gene
- APIP
- Ensembl
- ENSG00000149089
- Chromosome
- 11
- Canonical length
- 242 aa
- Protein class
- Enzymes, Metabolic proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
- Quaternary structure
- Homotetramer
OverviewNCBI Gene
Enables identical protein binding activity; methylthioribulose 1-phosphate dehydratase activity; and zinc ion binding activity. Involved in several processes, including L-methionine salvage from methylthioadenosine; protein homotetramerization; and pyroptotic inflammatory response. Located in cytoplasm. [provided by Alliance of Genome Resources, Jul 2025]
Canonical amino-acid sequenceUniProt
242 residues, UniProt reviewed canonical sequence.
>Q96GX9|APIP
1 MSGCDAREGD CCSRRCGAQD KEHPRYLIPE LCKQFYHLGW VTGTGGGISL KHGDEIYIAP
61 SGVQKERIQP EDMFVCDINE KDISGPSPSK KLKKSQCTPL FMNAYTMRGA GAVIHTHSKA
121 AVMATLLFPG REFKITHQEM IKGIKKCTSG GYYRYDDMLV VPIIENTPEE KDLKDRMAHA
181 MNEYPDSCAV LVRRHGVYVW GETWEKAKTM CECYDYLFDI AVSMKKVGLD PSQLPVGENG
241 IVLocalizationUniProt · AlphaFold · HPA
Whether an antibody against APIP can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.29
- Highest tissue expression
- 62 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 62 nTPM
- tongue: 36 nTPM
- spinal cord: 31 nTPM
- salivary gland: 30 nTPM
- thymus: 29 nTPM
- adipose tissue: 29 nTPM
Single-cell type
- breast lactating cells: 446 nCPM
- salivary duct cells: 157 nCPM
- adipocytes: 140 nCPM
- parietal cells: 140 nCPM
- submucosal glandular cells: 105 nCPM
- lacrimal acinar cells: 100 nCPM
Immune cell
- myeloid DC: 43 nTPM
- non-classical monocyte: 37 nTPM
- NK-cell: 32 nTPM
- intermediate monocyte: 30 nTPM
- classical monocyte: 27 nTPM
- plasmacytoid DC: 27 nTPM
Brain region
- white matter: 26 nTPM
- medulla oblongata: 23 nTPM
- cerebellum: 19 nTPM
- spinal cord: 19 nTPM
- pons: 19 nTPM
- basal ganglia: 18 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.74
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.79
- DepMap mean gene effect
- -0.11
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- apoptotic process
- L-methionine salvage from methylthioadenosine
- negative regulation of apoptotic process
- protein homotetramerization
- pyroptotic inflammatory response
- regulation of ERK1 and ERK2 cascade
Molecular functions
- identical protein binding
- zinc ion binding
- methylthioribulose 1-phosphate dehydratase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Class II aldolase/adducin N-terminal
- Class II aldolase/adducin N-terminal domain superfamily
- Class II Aldolase and Adducin N-terminal domain
- Methylthioribulose-1-phosphate dehydratase
- Methylthioribulose-1-phosphate dehydratase, eukaryotes
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of APIP in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads APIP as an antibody target. Whether an autoantibody or antibody against APIP could matter depends on whether native APIP is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
APIP is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label APIP as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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