ADH5
Alcohol dehydrogenase class-3
Also known as: ADH-3, ADHX, ADHX_HUMAN, FDH, GSNOR
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P11766
- Gene
- ADH5
- Ensembl
- ENSG00000197894
- Chromosome
- 4
- Canonical length
- 374 aa
- Protein class
- Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Plasma proteins, Potential drug targets, Predicted intracellular proteins
- Quaternary structure
- Homodimer
OverviewNCBI Gene
This gene encodes a member of the alcohol dehydrogenase family. Members of this family metabolize a wide variety of substrates, including ethanol, retinol, other aliphatic alcohols, hydroxysteroids, and lipid peroxidation products. The encoded protein forms a homodimer. It has virtually no activity for ethanol oxidation, but exhibits high activity for oxidation of long-chain primary alcohols and for oxidation of S-hydroxymethyl-glutathione, a spontaneous adduct between formaldehyde and glutathione. This enzyme is an important component of cellular metabolism for the elimination of formaldehyde, a potent irritant and sensitizing agent that causes lacrymation, rhinitis, pharyngitis, and contact dermatitis. The human genome contains several non-transcribed pseudogenes related to this gene. [provided by RefSeq, Oct 2008]
Canonical amino-acid sequenceUniProt
374 residues, UniProt reviewed canonical sequence.
>P11766|ADH5
1 MANEVIKCKA AVAWEAGKPL SIEEIEVAPP KAHEVRIKII ATAVCHTDAY TLSGADPEGC
61 FPVILGHEGA GIVESVGEGV TKLKAGDTVI PLYIPQCGEC KFCLNPKTNL CQKIRVTQGK
121 GLMPDGTSRF TCKGKTILHY MGTSTFSEYT VVADISVAKI DPLAPLDKVC LLGCGISTGY
181 GAAVNTAKLE PGSVCAVFGL GGVGLAVIMG CKVAGASRII GVDINKDKFA RAKEFGATEC
241 INPQDFSKPI QEVLIEMTDG GVDYSFECIG NVKVMRAALE ACHKGWGVSV VVGVAASGEE
301 IATRPFQLVT GRTWKGTAFG GWKSVESVPK LVSEYMSKKI KVDEFVTHNL SFDEINKAFE
361 LMHSGKSIRT VVKILocalizationUniProt · AlphaFold · HPA
Whether an antibody against ADH5 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.23
- Highest tissue expression
- 243 nTPM
Expression across tissuesHPA
Tissue
- liver: 243 nTPM
- blood vessel: 203 nTPM
- kidney: 160 nTPM
- urinary bladder: 147 nTPM
- colon: 146 nTPM
- epididymis: 133 nTPM
Single-cell type
- cytotrophoblasts: 349 nCPM
- extravillous trophoblasts: 348 nCPM
- decidual stromal cells: 324 nCPM
- migrating cytotrophoblasts: 252 nCPM
- peritubular myoid cells: 219 nCPM
- smooth muscle cells: 202 nCPM
Immune cell
- NK-cell: 51 nTPM
- T-reg: 49 nTPM
- eosinophil: 35 nTPM
- memory CD4 T-cell: 35 nTPM
- naive CD4 T-cell: 33 nTPM
- total PBMC: 33 nTPM
Brain region
- choroid plexus: 60 nTPM
- hypothalamus: 58 nTPM
- white matter: 49 nTPM
- spinal cord: 47 nTPM
- midbrain: 45 nTPM
- thalamus: 45 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about ADH5.
Disease | AllUniProt
Conditions ADH5 is implicated in, by any mechanism.
- AMED syndrome, digenic (AMEDS) MIM:619151
Disease | GeneticClinVar
4 pathogenic / likely-pathogenic of 53 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- AMED syndrome, digenic
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.56
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.03
- DepMap mean gene effect
- -0.27
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- fatty acid omega-oxidation
- formaldehyde catabolic process
- positive regulation of blood pressure
- respiratory system process
- response to lipopolysaccharide
- response to nitrosative stress
- response to redox state
- retinoid metabolic process
Molecular functions
- alcohol dehydrogenase (NAD+) activity
- electron transfer activity
- fatty acid binding
- formaldehyde dehydrogenase (NAD+) activity
- identical protein binding
- S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity
- S-nitrosoglutathione reductase (NADH) activity
- zinc ion binding
- S-(hydroxymethyl)glutathione dehydrogenase (NAD+) activity
- S-(hydroxymethyl)glutathione dehydrogenase (NADP+) activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads ADH5 as an antibody target. Whether an autoantibody or antibody against ADH5 could matter depends on whether native ADH5 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
ADH5 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label ADH5 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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