WFS1
Wolframin
Also known as: DFNA14, DFNA38, DFNA6, DIDMOAD, WFS, WFS1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O76024
- Gene
- WFS1
- Ensembl
- ENSG00000109501
- Chromosome
- 4
- Canonical length
- 890 aa
- Protein class
- Disease related genes, Human disease related genes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
OverviewNCBI Gene
This gene encodes a transmembrane protein, which is located primarily in the endoplasmic reticulum and ubiquitously expressed with highest levels in brain, pancreas, heart, and insulinoma beta-cell lines. Mutations in this gene are associated with Wolfram syndrome, also called DIDMOAD (Diabetes Insipidus, Diabetes Mellitus, Optic Atrophy, and Deafness), an autosomal recessive disorder. The disease affects the brain and central nervous system. Mutations in this gene can also cause autosomal dominant deafness 6 (DFNA6), also known as DFNA14 or DFNA38. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Mar 2009]
Canonical amino-acid sequenceUniProt
890 residues, UniProt reviewed canonical sequence.
>O76024|WFS1
1 MDSNTAPLGP SCPQPPPAPQ PQARSRLNAT ASLEQERSER PRAPGPQAGP GPGVRDAAAP
61 AEPQAQHTRS RERADGTGPT KGDMEIPFEE VLERAKAGDP KAQTEVGKHY LQLAGDTDEE
121 LNSCTAVDWL VLAAKQGRRE AVKLLRRCLA DRRGITSENE REVRQLSSET DLERAVRKAA
181 LVMYWKLNPK KKKQVAVAEL LENVGQVNEH DGGAQPGPVP KSLQKQRRML ERLVSSESKN
241 YIALDDFVEI TKKYAKGVIP SSLFLQDDED DDELAGKSPE DLPLRLKVVK YPLHAIMEIK
301 EYLIDMASRA GMHWLSTIIP THHINALIFF FIVSNLTIDF FAFFIPLVIF YLSFISMVIC
361 TLKVFQDSKA WENFRTLTDL LLRFEPNLDV EQAEVNFGWN HLEPYAHFLL SVFFVIFSFP
421 IASKDCIPCS ELAVITGFFT VTSYLSLSTH AEPYTRRALA TEVTAGLLSL LPSMPLNWPY
481 LKVLGQTFIT VPVGHLVVLN VSVPCLLYVY LLYLFFRMAQ LRNFKGTYCY LVPYLVCFMW
541 CELSVVILLE STGLGLLRAS IGYFLFLFAL PILVAGLALV GVLQFARWFT SLELTKIAVT
601 VAVCSVPLLL RWWTKASFSV VGMVKSLTRS SMVKLILVWL TAIVLFCWFY VYRSEGMKVY
661 NSTLTWQQYG ALCGPRAWKE TNMARTQILC SHLEGHRVTW TGRFKYVRVT DIDNSAESAI
721 NMLPFFIGDW MRCLYGEAYP ACSPGNTSTA EEELCRLKLL AKHPCHIKKF DRYKFEITVG
781 MPFSSGADGS RSREEDDVTK DIVLRASSEF KSVLLSLRQG SLIEFSTILE GRLGSKWPVF
841 ELKAISCLNC MAQLSPTRRH VKIEHDWRST VHGAVKFAFD FFFFPFLSAALocalizationUniProt · AlphaFold · HPA
Whether an antibody against WFS1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 11
- Mean surface accessibility (rSASA)
- 0.38
- Highest tissue expression
- 71 nTPM
Expression across tissuesHPA
Tissue
- blood vessel: 71 nTPM
- basal ganglia: 70 nTPM
- ovary: 68 nTPM
- endometrium: 65 nTPM
- fallopian tube: 56 nTPM
- urinary bladder: 49 nTPM
Single-cell type
- extravillous trophoblasts: 175 nCPM
- alveolar cells type 1: 171 nCPM
- lymphatic endothelial cells: 117 nCPM
- somatotrophs: 84 nCPM
- peritubular myoid cells: 70 nCPM
- astrocytes: 69 nCPM
Immune cell
- MAIT T-cell: 4 nTPM
- gdT-cell: 2.7 nTPM
- memory B-cell: 2.4 nTPM
- memory CD8 T-cell: 2.1 nTPM
- naive CD8 T-cell: 1.5 nTPM
- NK-cell: 1.5 nTPM
Brain region
- basal ganglia: 153 nTPM
- amygdala: 91 nTPM
- midbrain: 91 nTPM
- thalamus: 91 nTPM
- hypothalamus: 87 nTPM
- pons: 75 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about WFS1.
Disease | AllUniProt
Conditions WFS1 is implicated in, by any mechanism.
- Wolfram syndrome 1 (WFS1) MIM:222300
- Deafness, autosomal dominant, 6 (DFNA6) MIM:600965
- Wolfram-like syndrome autosomal dominant (WFSL) MIM:614296
- Cataract 41 (CTRCT41) MIM:116400
Disease | GeneticClinVar
238 pathogenic / likely-pathogenic of 2,146 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Wolfram syndrome 1
- Autosomal dominant nonsyndromic hearing loss 6
- Wolfram-like syndrome
- Type 2 diabetes mellitus
- Cataract 41
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.93
- gnomAD pLI
- 0
- gnomAD missense Z
- -4.71
- DepMap mean gene effect
- 0.18
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- calcium ion homeostasis
- endoplasmic reticulum calcium ion homeostasis
- endoplasmic reticulum unfolded protein response
- ER overload response
- ERAD pathway
- glucose homeostasis
- intrinsic apoptotic signaling pathway
- kidney development
- negative regulation of apoptotic process
- negative regulation of ATF6-mediated unfolded protein response
- negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
- negative regulation of neuron apoptotic process
- negative regulation of programmed cell death
- negative regulation of response to endoplasmic reticulum stress
- negative regulation of transcription by RNA polymerase II
- negative regulation of translation
- negative regulation of type B pancreatic cell apoptotic process
- nervous system process
- olfactory behavior
- pancreas development
- positive regulation of calcium ion transport
- positive regulation of ERAD pathway
- positive regulation of growth
- positive regulation of protein metabolic process
- positive regulation of protein ubiquitination
- protein stabilization
- renal water homeostasis
- response to endoplasmic reticulum stress
- sensory perception of sound
- visual perception
Molecular functions
- ATPase binding
- calcium-dependent protein binding
- calmodulin binding
- DNA-binding transcription factor binding
- proteasome binding
- protein carrier chaperone
- ubiquitin protein ligase binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Tetratricopeptide-like helical domain superfamily
- Wolframin
- Wolframin family
- Wolframin, cysteine-rich domain
- Wolframin, Sel1-like repeat
- Wolframin, EF-hand domain
- Wolframin, OB-fold domain
- Wolframin C-terminal OB-fold domain
- Wolframin EF-hand domain
- Wolframin Sel1-like repeat
- Wolframin cysteine-rich domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of WFS1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads WFS1 as an antibody target. Whether an autoantibody or antibody against WFS1 could matter depends on whether native WFS1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
WFS1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label WFS1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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