Seroatlas · Human Serome Atlas

TRMT10B

tRNA methyltransferase 10 homolog B

Also known as: bA3J10.9, FLJ31455, RG9MTD3, TM10B_HUMAN

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q6PF06
Gene
TRMT10B
Ensembl
ENSG00000165275
Chromosome
9
Canonical length
316 aa
Protein class
Enzymes, Predicted intracellular proteins
Subcellular location
Nucleoplasm,Plasma membrane

OverviewNCBI Gene

Enables tRNA (guanosine(9)-N1)-methyltransferase activity. Involved in protein insertion into mitochondrial inner membrane. Located in cytosol and mitochondrial inner membrane. Part of TIM22 mitochondrial import inner membrane insertion complex. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

316 residues, UniProt reviewed canonical sequence.

>Q6PF06|TRMT10B
     1  MDWKLEGSTQ KVESPVLQGQ EGILEETGED GLPEGFQLLQ IDAEGECQEG EILATGSTAW
    61  CSKNVQRKQR HWEKIVAAKK SKRKQEKERR KANRAENPGI CPQHSKRFLR ALTKDKLLEA
   121  KHSGPRLCID LSMTHYMSKK ELSRLAGQIR RLYGSNKKAD RPFWICLTGF TTDSPLYEEC
   181  VRMNDGFSSY LLDITEEDCF SLFPLETLVY LTPDSEHALE DVDLNKVYIL GGLVDESIQK
   241  KVTFQKAREY SVKTARLPIQ EYMVRNQNGK NYHSEILAIN QVFDILSTYL ETHNWPEALK
   301  KGVSSGKGYI LRNSVE

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against TRMT10B can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Other membrane
Secreted
No
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.39
Highest tissue expression
10 nTPM

Expression across tissuesHPA

Tissue

  • skin: 10 nTPM
  • ovary: 9.2 nTPM
  • cerebellum: 8.3 nTPM
  • colon: 8 nTPM
  • prostate: 8 nTPM
  • cervix: 7.8 nTPM

Single-cell type

  • bergmann glia: 80 nCPM
  • leydig cells: 76 nCPM
  • fibro-adipogenic progenitors: 71 nCPM
  • tuft cells: 69 nCPM
  • peritubular myoid cells: 66 nCPM
  • oligodendrocytes: 66 nCPM

Immune cell

  • naive B-cell: 4.2 nTPM
  • MAIT T-cell: 3.8 nTPM
  • basophil: 3.4 nTPM
  • memory B-cell: 3.4 nTPM
  • naive CD4 T-cell: 3.2 nTPM
  • gdT-cell: 3.1 nTPM

Brain region

  • cerebellum: 24 nTPM
  • white matter: 22 nTPM
  • medulla oblongata: 19 nTPM
  • basal ganglia: 19 nTPM
  • cerebral cortex: 18 nTPM
  • midbrain: 18 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.02
gnomAD pLI
0
gnomAD missense Z
0.3
DepMap mean gene effect
0.03
DepMap dependency class
none

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads TRMT10B as an antibody target. Whether an autoantibody or antibody against TRMT10B could matter depends on whether native TRMT10B is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

TRMT10B is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label TRMT10B as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/TRMT10B. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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