TLR10
Toll-like receptor 10
Also known as: CD290, TLR10_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9BXR5
- Gene
- TLR10
- Ensembl
- ENSG00000174123
- Chromosome
- 4
- Canonical length
- 811 aa
- Protein class
- CD markers, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Endoplasmic reticulum,Plasma membrane
- Quaternary structure
- Homodimer
OverviewNCBI Gene
The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and functional similarities. They recognize pathogen-associated molecular patterns (PAMPs) that are expressed on infectious agents, and mediate the production of cytokines necessary for the development of effective immunity. The various TLRs exhibit different patterns of expression. This gene is most highly expressed in lymphoid tissues such as spleen, lymph node, thymus, and tonsil. Multiple alternatively spliced transcript variants which encode different protein isoforms have been found for this gene. [provided by RefSeq, Aug 2010]
Canonical amino-acid sequenceUniProt
811 residues, UniProt reviewed canonical sequence.
>Q9BXR5|TLR10
1 MRLIRNIYIF CSIVMTAEGD APELPEEREL MTNCSNMSLR KVPADLTPAT TTLDLSYNLL
61 FQLQSSDFHS VSKLRVLILC HNRIQQLDLK TFEFNKELRY LDLSNNRLKS VTWYLLAGLR
121 YLDLSFNDFD TMPICEEAGN MSHLEILGLS GAKIQKSDFQ KIAHLHLNTV FLGFRTLPHY
181 EEGSLPILNT TKLHIVLPMD TNFWVLLRDG IKTSKILEMT NIDGKSQFVS YEMQRNLSLE
241 NAKTSVLLLN KVDLLWDDLF LILQFVWHTS VEHFQIRNVT FGGKAYLDHN SFDYSNTVMR
301 TIKLEHVHFR VFYIQQDKIY LLLTKMDIEN LTISNAQMPH MLFPNYPTKF QYLNFANNIL
361 TDELFKRTIQ LPHLKTLILN GNKLETLSLV SCFANNTPLE HLDLSQNLLQ HKNDENCSWP
421 ETVVNMNLSY NKLSDSVFRC LPKSIQILDL NNNQIQTVPK ETIHLMALRE LNIAFNFLTD
481 LPGCSHFSRL SVLNIEMNFI LSPSLDFVQS CQEVKTLNAG RNPFRCTCEL KNFIQLETYS
541 EVMMVGWSDS YTCEYPLNLR GTRLKDVHLH ELSCNTALLI VTIVVIMLVL GLAVAFCCLH
601 FDLPWYLRML GQCTQTWHRV RKTTQEQLKR NVRFHAFISY SEHDSLWVKN ELIPNLEKED
661 GSILICLYES YFDPGKSISE NIVSFIEKSY KSIFVLSPNF VQNEWCHYEF YFAHHNLFHE
721 NSDHIILILL EPIPFYCIPT RYHKLKALLE KKAYLEWPKD RRKCGLFWAN LRAAINVNVL
781 ATREMYELQT FTELNEESRG STISLMRTDC LLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TLR10 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.29
- Highest tissue expression
- 45 nTPM
Expression across tissuesHPA
Tissue
- tonsil: 45 nTPM
- lymph node: 40 nTPM
- spleen: 23 nTPM
- appendix: 15 nTPM
- small intestine: 9.2 nTPM
- thymus: 4.8 nTPM
Single-cell type
- microglia: 92 nCPM
- neutrophils: 75 nCPM
- b-cells: 68 nCPM
- cdc: 18 nCPM
- pdcs: 15 nCPM
- oligodendrocyte progenitor cells: 13 nCPM
Immune cell
- memory B-cell: 39 nTPM
- naive B-cell: 24 nTPM
- plasmacytoid DC: 7.2 nTPM
- myeloid DC: 6.5 nTPM
- non-classical monocyte: 3.6 nTPM
- intermediate monocyte: 2.8 nTPM
Brain region
- white matter: 5.4 nTPM
- medulla oblongata: 4.9 nTPM
- spinal cord: 4.9 nTPM
- pons: 4.4 nTPM
- thalamus: 3.7 nTPM
- cerebral cortex: 3.6 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.01
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.24
- DepMap mean gene effect
- 0.18
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to bacterial lipopeptide
- immune response
- inflammatory response
- innate immune response
- toll-like receptor signaling pathway
Molecular functions
- identical protein binding
- lipopeptide binding
- signaling receptor activity
- Toll-like receptor 2 binding
- transmembrane signaling receptor activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TLR10 as an antibody target. Whether an autoantibody or antibody against TLR10 could matter depends on whether native TLR10 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TLR10 is annotated at the cell surface, where native TLR10 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label TLR10 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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