ST8SIA1
Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase
Also known as: SIA8A_HUMAN, SIAT8, SIAT8A
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q92185
- Gene
- ST8SIA1
- Ensembl
- ENSG00000111728
- Chromosome
- 12
- Canonical length
- 356 aa
- Protein class
- Enzymes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins
OverviewNCBI Gene
Gangliosides are membrane-bound glycosphingolipids containing sialic acid. Ganglioside GD3 is known to be important for cell adhesion and growth of cultured malignant cells. The protein encoded by this gene is a type II membrane protein that catalyzes the transfer of sialic acid from CMP-sialic acid to GM3 to produce gangliosides GD3 and GT3. The encoded protein may be found in the Golgi apparatus and is a member of glycosyltransferase family 29. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2015]
Canonical amino-acid sequenceUniProt
356 residues, UniProt reviewed canonical sequence.
>Q92185|ST8SIA1
1 MSPCGRARRQ TSRGAMAVLA WKFPRTRLPM GASALCVVVL CWLYIFPVYR LPNEKEIVQG
61 VLQQGTAWRR NQTAARAFRK QMEDCCDPAH LFAMTKMNSP MGKSMWYDGE FLYSFTIDNS
121 TYSLFPQATP FQLPLKKCAV VGNGGILKKS GCGRQIDEAN FVMRCNLPPL SSEYTKDVGS
181 KSQLVTANPS IIRQRFQNLL WSRKTFVDNM KIYNHSYIYM PAFSMKTGTE PSLRVYYTLS
241 DVGANQTVLF ANPNFLRSIG KFWKSRGIHA KRLSTGLFLV SAALGLCEEV AIYGFWPFSV
301 NMHEQPISHH YYDNVLPFSG FHAMPEEFLQ LWYLHKIGAL RMQLDPCEDT SLQPTSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against ST8SIA1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.31
- Highest tissue expression
- 6 nTPM
Expression across tissuesHPA
Tissue
- cerebellum: 6 nTPM
- parathyroid gland: 5.9 nTPM
- retina: 5.6 nTPM
- cerebral cortex: 4.9 nTPM
- tonsil: 4.5 nTPM
- hypothalamus: 4.4 nTPM
Single-cell type
- bergmann glia: 486 nCPM
- ependymal cells: 398 nCPM
- oligodendrocyte progenitor cells: 336 nCPM
- myosatellite cells: 267 nCPM
- mast cells: 218 nCPM
- astrocytes: 162 nCPM
Immune cell
- T-reg: 0.8 nTPM
- memory CD4 T-cell: 0.7 nTPM
- memory CD8 T-cell: 0.6 nTPM
- basophil: 0.3 nTPM
- MAIT T-cell: 0.2 nTPM
- naive CD8 T-cell: 0.2 nTPM
Brain region
- cerebellum: 43 nTPM
- medulla oblongata: 37 nTPM
- hypothalamus: 34 nTPM
- pons: 32 nTPM
- midbrain: 32 nTPM
- spinal cord: 31 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.53
- gnomAD pLI
- 0.49
- gnomAD missense Z
- 1.16
- DepMap mean gene effect
- -0.01
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- carbohydrate metabolic process
- cellular response to heat
- epithelial cell proliferation
- glycosphingolipid biosynthetic process
- N-glycan processing
- oligosaccharide metabolic process
- positive regulation of epithelial cell proliferation
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads ST8SIA1 as an antibody target. Whether an autoantibody or antibody against ST8SIA1 could matter depends on whether native ST8SIA1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
ST8SIA1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label ST8SIA1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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