SQOR
Sulfide:quinone oxidoreductase, mitochondrial
Also known as: CGI-44, SQOR_HUMAN, SQR, SQRDL
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9Y6N5
- Gene
- SQOR
- Ensembl
- ENSG00000137767
- Chromosome
- 15
- Canonical length
- 450 aa
- Protein class
- Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
- Subcellular location
- Mitochondria
OverviewNCBI Gene
The protein encoded by this gene may function in mitochondria to catalyze the conversion of sulfide to persulfides, thereby decreasing toxic concencrations of sulfide. Alternative splicing results in multiple transcript variants that encode the same protein. [provided by RefSeq, Sep 2012]
Canonical amino-acid sequenceUniProt
450 residues, UniProt reviewed canonical sequence.
>Q9Y6N5|SQOR
1 MVPLVAVVSG PRAQLFACLL RLGTQQVGPL QLHTGASHAA RNHYEVLVLG GGSGGITMAA
61 RMKRKVGAEN VAIVEPSERH FYQPIWTLVG AGAKQLSSSG RPTASVIPSG VEWIKARVTE
121 LNPDKNCIHT DDDEKISYRY LIIALGIQLD YEKIKGLPEG FAHPKIGSNY SVKTVEKTWK
181 ALQDFKEGNA IFTFPNTPVK CAGAPQKIMY LSEAYFRKTG KRSKANIIFN TSLGAIFGVK
241 KYADALQEII QERNLTVNYK KNLIEVRADK QEAVFENLDK PGETQVISYE MLHVTPPMSP
301 PDVLKTSPVA DAAGWVDVDK ETLQHRRYPN VFGIGDCTNL PTSKTAAAVA AQSGILDRTI
361 SVIMKNQTPT KKYDGYTSCP LVTGYNRVIL AEFDYKAEPL ETFPFDQSKE RLSMYLMKAD
421 LMPFLYWNMM LRGYWGGPAF LRKLFHLGMSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against SQOR can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.26
- Highest tissue expression
- 197 nTPM
Expression across tissuesHPA
Tissue
- colon: 197 nTPM
- rectum: 168 nTPM
- skeletal muscle: 138 nTPM
- esophagus: 122 nTPM
- liver: 81 nTPM
- salivary gland: 59 nTPM
Single-cell type
- esophageal apical cells: 685 nCPM
- colonocytes: 339 nCPM
- esophageal suprabasal cells: 203 nCPM
- enteric transient amplifying cells: 198 nCPM
- neutrophils: 186 nCPM
- enteric stem cells: 179 nCPM
Immune cell
- neutrophil: 304 nTPM
- classical monocyte: 212 nTPM
- total PBMC: 170 nTPM
- intermediate monocyte: 161 nTPM
- non-classical monocyte: 153 nTPM
- T-reg: 149 nTPM
Brain region
- choroid plexus: 15 nTPM
- white matter: 14 nTPM
- medulla oblongata: 14 nTPM
- spinal cord: 12 nTPM
- thalamus: 12 nTPM
- pons: 11 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about SQOR.
Disease | AllUniProt
Conditions SQOR is implicated in, by any mechanism.
- Sulfide:quinone oxidoreductase deficiency (SQORD) MIM:619221
Disease | GeneticClinVar
2 pathogenic / likely-pathogenic of 75 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Sulfide quinone oxidoreductase deficiency
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.18
- gnomAD pLI
- 0
- DepMap mean gene effect
- -0.09
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- using sulfide:quinone oxidoreductase
- sulfide oxidation
Molecular functions
- FAD binding
- quinone binding
- glutathione-dependent sulfide quinone oxidoreductase activity
- sulfide:quinone oxidoreductase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads SQOR as an antibody target. Whether an autoantibody or antibody against SQOR could matter depends on whether native SQOR is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
SQOR is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label SQOR as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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