SPINK5
Serine protease inhibitor Kazal-type 5
Also known as: DKFZp686K19184, FLJ21544, FLJ97536, FLJ97596, FLJ99794, ISK5_HUMAN, LEKTI, LETKI, NETS, NS, VAKTI
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9NQ38
- Gene
- SPINK5
- Ensembl
- ENSG00000133710
- Chromosome
- 5
- Canonical length
- 1064 aa
- Protein class
- Disease related genes, Human disease related genes, Plasma proteins, Predicted secreted proteins
- Subcellular location
- Vesicles
- Secretome location
- Secreted in other tissues
OverviewNCBI Gene
This gene encodes a multidomain serine protease inhibitor that contains 15 potential inhibitory domains. The encoded preproprotein is proteolytically processed to generate multiple protein products, which may exhibit unique activities and specificities. These proteins may play a role in skin and hair morphogenesis, as well as anti-inflammatory and antimicrobial protection of mucous epithelia. Mutations in this gene may result in Netherton syndrome, a disorder characterized by ichthyosis, defective cornification, and atopy. This gene is present in a gene cluster on chromosome 5. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2015]
Canonical amino-acid sequenceUniProt
1064 residues, UniProt reviewed canonical sequence.
>Q9NQ38|SPINK5
1 MKIATVSVLL PLALCLIQDA ASKNEDQEMC HEFQAFMKNG KLFCPQDKKF FQSLDGIMFI
61 NKCATCKMIL EKEAKSQKRA RHLARAPKAT APTELNCDDF KKGERDGDFI CPDYYEAVCG
121 TDGKTYDNRC ALCAENAKTG SQIGVKSEGE CKSSNPEQDV CSAFRPFVRD GRLGCTREND
181 PVLGPDGKTH GNKCAMCAEL FLKEAENAKR EGETRIRRNA EKDFCKEYEK QVRNGRLFCT
241 RESDPVRGPD GRMHGNKCAL CAEIFKQRFS EENSKTDQNL GKAEEKTKVK REIVKLCSQY
301 QNQAKNGILF CTRENDPIRG PDGKMHGNLC SMCQAYFQAE NEEKKKAEAR ARNKRESGKA
361 TSYAELCSEY RKLVRNGKLA CTRENDPIQG PDGKVHGNTC SMCEVFFQAE EEEKKKKEGK
421 SRNKRQSKST ASFEELCSEY RKSRKNGRLF CTRENDPIQG PDGKMHGNTC SMCEAFFQQE
481 ERARAKAKRE AAKEICSEFR DQVRNGTLIC TREHNPVRGP DGKMHGNKCA MCASVFKLEE
541 EEKKNDKEEK GKVEAEKVKR EAVQELCSEY RHYVRNGRLP CTRENDPIEG LDGKIHGNTC
601 SMCEAFFQQE AKEKERAEPR AKVKREAEKE TCDEFRRLLQ NGKLFCTREN DPVRGPDGKT
661 HGNKCAMCKA VFQKENEERK RKEEEDQRNA AGHGSSGGGG GNTQDECAEY REQMKNGRLS
721 CTRESDPVRD ADGKSYNNQC TMCKAKLERE AERKNEYSRS RSNGTGSESG KDTCDEFRSQ
781 MKNGKLICTR ESDPVRGPDG KTHGNKCTMC KEKLEREAAE KKKKEDEDRS NTGERSNTGE
841 RSNDKEDLCR EFRSMQRNGK LICTRENNPV RGPYGKMHIN KCAMCQSIFD REANERKKKD
901 EEKSSSKPSN NAKDECSEFR NYIRNNELIC PRENDPVHGA DGKFYTNKCY MCRAVFLTEA
961 LERAKLQEKP SHVRASQEED SPDSFSSLDS EMCKDYRVLP RIGYLCPKDL KPVCGDDGQT
1021 YNNPCMLCHE NLIRQTNTHI RSTGKCEESS TPGTTAASMP PSDELocalizationUniProt · AlphaFold · HPA
Whether an antibody against SPINK5 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.44
- Highest tissue expression
- 954 nTPM
Expression across tissuesHPA
Tissue
- esophagus: 954 nTPM
- vagina: 552 nTPM
- cervix: 539 nTPM
- skin: 300 nTPM
- tonsil: 275 nTPM
- salivary gland: 123 nTPM
Single-cell type
- esophageal apical cells: 47,706 nCPM
- suprabasal keratinocytes: 6,584 nCPM
- esophageal suprabasal cells: 5,817 nCPM
- basal keratinocytes: 676 nCPM
- esophageal basal cells: 629 nCPM
- colonocytes: 140 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- white matter: 1 nTPM
- cerebral cortex: 0.9 nTPM
- pons: 0.9 nTPM
- basal ganglia: 0.8 nTPM
- medulla oblongata: 0.8 nTPM
- thalamus: 0.8 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about SPINK5.
Disease | AllUniProt
Conditions SPINK5 is implicated in, by any mechanism.
- Netherton syndrome (NETH) MIM:256500
Disease | GeneticClinVar
127 pathogenic / likely-pathogenic of 1,194 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Ichthyosis linearis circumflexa
- Netherton syndrome
- Increased circulating IgE concentration
- Erythroderma
- Susceptibility to nonsyndromic otitis media
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.93
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.28
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell differentiation
- epidermal cell differentiation
- epithelial cell differentiation
- extracellular matrix organization
- hair cell differentiation
- negative regulation of angiogenesis
- negative regulation of immune response
- negative regulation of proteolysis
- regulation of cell adhesion
- regulation of T cell differentiation
- regulation of timing of anagen
- negative regulation of antibacterial peptide production
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads SPINK5 as an antibody target. Whether an autoantibody or antibody against SPINK5 could matter depends on whether native SPINK5 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
SPINK5 is annotated as secreted, so native SPINK5 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label SPINK5 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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