SLURP1
Secreted Ly-6/uPAR-related protein 1
Also known as: ANUP, ARS, ArsB, LY6-MT, LY6LS, MDM, SLUR1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P55000
- Gene
- SLURP1
- Ensembl
- ENSG00000126233
- Chromosome
- 8
- Canonical length
- 103 aa
- Protein class
- Disease related genes, Human disease related genes, Plasma proteins, Potential drug targets, Predicted secreted proteins, Transporters
- Secretome location
- Secreted in other tissues
- Quaternary structure
- Homodimer
OverviewNCBI Gene
The protein encoded by this gene is a member of the Ly6/uPAR family but lacks a GPI-anchoring signal sequence. It is thought that this secreted protein contains antitumor activity. Mutations in this gene have been associated with Mal de Meleda, a rare autosomal recessive skin disorder. This gene maps to the same chromosomal region as several members of the Ly6/uPAR family of glycoprotein receptors. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
103 residues, UniProt reviewed canonical sequence.
>P55000|SLURP1
1 MASRWAVQLL LVAAWSMGCG EALKCYTCKE PMTSASCRTI TRCKPEDTAC MTTLVTVEAE
61 YPFNQSPVVT RSCSSSCVAT DPDSIGAAHL IFCCFRDLCN SELLocalizationUniProt · AlphaFold · HPA
Whether an antibody against SLURP1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.41
- Highest tissue expression
- 1,037 nTPM
Expression across tissuesHPA
Tissue
- esophagus: 1,037 nTPM
- skin: 855 nTPM
- vagina: 195 nTPM
- cervix: 146 nTPM
- salivary gland: 65 nTPM
- tonsil: 16 nTPM
Single-cell type
- esophageal apical cells: 29,388 nCPM
- esophageal suprabasal cells: 2,800 nCPM
- suprabasal keratinocytes: 1,512 nCPM
- ocular epithelial cells: 38 nCPM
- esophageal basal cells: 35 nCPM
- schwann cells: 17 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- cerebellum: 2.7 nTPM
- cerebral cortex: 1.9 nTPM
- thalamus: 1.5 nTPM
- hippocampal formation: 1.4 nTPM
- pons: 1.3 nTPM
- basal ganglia: 1.2 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about SLURP1.
Disease | AllUniProt
Conditions SLURP1 is implicated in, by any mechanism.
- Mal de Meleda (MDM) MIM:248300
Disease | GeneticClinVar
15 pathogenic / likely-pathogenic of 48 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Acroerythrokeratoderma
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.31
- gnomAD pLI
- 0.26
- gnomAD missense Z
- 0.59
- DepMap mean gene effect
- 0.11
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell activation
- cell adhesion
- locomotory behavior
- negative regulation of cell migration
- negative regulation of cell population proliferation
- negative regulation of keratinocyte proliferation
- neuromuscular process controlling posture
- urokinase plasminogen activator signaling pathway
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of SLURP1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads SLURP1 as an antibody target. Whether an autoantibody or antibody against SLURP1 could matter depends on whether native SLURP1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
SLURP1 is annotated as secreted, so native SLURP1 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label SLURP1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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