SLC5A11
Sodium/myo-inositol cotransporter 2
Also known as: KST1, SC5AB_HUMAN, SGLT6, SMIT2
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q8WWX8
- Gene
- SLC5A11
- Ensembl
- ENSG00000158865
- Chromosome
- 16
- Canonical length
- 675 aa
- Protein class
- Metabolic proteins, Predicted membrane proteins, Transporters
- Subcellular location
- Nucleoplasm,Cytosol
OverviewNCBI Gene
Cotransporters, such as SLC5A11, represent a major class of proteins that make use of ion gradients to drive active transport for the cellular accumulation of nutrients, neurotransmitters, osmolytes, and ions Roll et al. (2002) [PubMed 12039040].[supplied by OMIM, Mar 2008]
Canonical amino-acid sequenceUniProt
675 residues, UniProt reviewed canonical sequence.
>Q8WWX8|SLC5A11
1 MESGTSSPQP PQLDPLDAFP QKGLEPGDIA VLVLYFLFVL AVGLWSTVKT KRDTVKGYFL
61 AGGDMVWWPV GASLFASNVG SGHFIGLAGS GAATGISVSA YELNGLFSVL MLAWIFLPIY
121 IAGQVTTMPE YLRKRFGGIR IPIILAVLYL FIYIFTKISV DMYAGAIFIQ QSLHLDLYLA
181 IVGLLAITAV YTVAGGLAAV IYTDALQTLI MLIGALTLMG YSFAAVGGME GLKEKYFLAL
241 ASNRSENSSC GLPREDAFHI FRDPLTSDLP WPGVLFGMSI PSLWYWCTDQ VIVQRTLAAK
301 NLSHAKGGAL MAAYLKVLPL FIMVFPGMVS RILFPDQVAC ADPEICQKIC SNPSGCSDIA
361 YPKLVLELLP TGLRGLMMAV MVAALMSSLT SIFNSASTIF TMDLWNHLRP RASEKELMIV
421 GRVFVLLLVL VSILWIPVVQ ASQGGQLFIY IQSISSYLQP PVAVVFIMGC FWKRTNEKGA
481 FWGLISGLLL GLVRLVLDFI YVQPRCDQPD ERPVLVKSIH YLYFSMILST VTLITVSTVS
541 WFTEPPSKEM VSHLTWFTRH DPVVQKEQAP PAAPLSLTLS QNGMPEASSS SSVQFEMVQE
601 NTSKTHSCDM TPKQSKVVKA ILWLCGIQEK GKEELPARAE AIIVSLEENP LVKTLLDVNL
661 IFCVSCAIFI WGYFALocalizationUniProt · AlphaFold · HPA
Whether an antibody against SLC5A11 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 14
- Mean surface accessibility (rSASA)
- 0.26
- Highest tissue expression
- 78 nTPM
Expression across tissuesHPA
Tissue
- spinal cord: 78 nTPM
- midbrain: 46 nTPM
- hippocampal formation: 21 nTPM
- hypothalamus: 14 nTPM
- basal ganglia: 10 nTPM
- small intestine: 7.8 nTPM
Single-cell type
- oligodendrocytes: 716 nCPM
- proximal tubule cells: 73 nCPM
- enterocytes: 19 nCPM
- loop of henle epithelial cells: 10 nCPM
- renal collecting duct intercalated cells: 7.8 nCPM
- renal collecting duct principal cells: 7.8 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- white matter: 126 nTPM
- medulla oblongata: 75 nTPM
- pons: 61 nTPM
- basal ganglia: 57 nTPM
- cerebellum: 57 nTPM
- thalamus: 48 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about SLC5A11.
Disease | ImmuneIEDB
Conditions an epitope on SLC5A11 was assayed in.
- lymphoid leukemia T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.07
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.51
- DepMap mean gene effect
- 0.01
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
- D-glucose:sodium symporter activity
- myo-inositol transmembrane transporter activity
- polyol transmembrane transporter activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads SLC5A11 as an antibody target. Whether an autoantibody or antibody against SLC5A11 could matter depends on whether native SLC5A11 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
SLC5A11 is annotated at the cell surface, where native SLC5A11 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label SLC5A11 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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