Seroatlas · Human Serome Atlas

SLC38A11

Putative sodium-coupled neutral amino acid transporter 11

Also known as: AVT2, FLJ39822, S38AB_HUMAN

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q08AI6
Gene
SLC38A11
Ensembl
ENSG00000169507
Chromosome
2
Canonical length
406 aa
Protein class
Predicted membrane proteins, Transporters

OverviewNCBI Gene

Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

406 residues, UniProt reviewed canonical sequence.

>Q08AI6|SLC38A11
     1  MKQAGFPLGI LLLFWVSYVT DFSLVLLIKG GALSGTDTYQ SLVNKTFGFP GYLLLSVLQF
    61  LYPFIAMISY NIIAGDTLSK VFQRIPGVDP ENVFIGRHFI IGLSTVTFTL PLSLYRNIAK
   121  LGKVSLISTG LTTLILGIVM ARAISLGPHI PKTEDAWVFA KPNAIQAVGV MSFAFICHHN
   181  SFLVYSSLEE PTVAKWSRLI HMSIVISVFI CIFFATCGYL TFTGFTQGDL FENYCRNDDL
   241  VTFGRFCYGV TVILTYPMEC FVTREVIANV FFGGNLSSVF HIVVTVMVIT VATLVSLLID
   301  CLGIVLELNG VLCATPLIFI IPSACYLKLS EEPRTHSDKI MSCVMLPIGA VVMVFGFVMA
   361  ITNTQDCTHG QEMFYCFPDN FSLTNTSESH VQQTTQLSTL NISIFQ

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against SLC38A11 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Unknown
Secreted
No
Transmembrane segments
10
Mean surface accessibility (rSASA)
0.27
Highest tissue expression
30 nTPM

Expression across tissuesHPA

Tissue

  • epididymis: 30 nTPM
  • choroid plexus: 24 nTPM
  • seminal vesicle: 13 nTPM
  • gallbladder: 13 nTPM
  • prostate: 8.3 nTPM
  • stomach: 7.9 nTPM

Single-cell type

  • neuroendocrine cells: 657 nCPM
  • choroid plexus epithelial cells: 302 nCPM
  • vascular smooth muscle cells: 261 nCPM
  • adrenal medulla cells: 245 nCPM
  • mast cells: 224 nCPM
  • renal connecting tubule cells: 202 nCPM

Immune cell

  • naive B-cell: 3.8 nTPM
  • memory B-cell: 1.6 nTPM
  • total PBMC: 0.1 nTPM
  • basophil: 0 nTPM
  • classical monocyte: 0 nTPM
  • eosinophil: 0 nTPM

Brain region

  • choroid plexus: 51 nTPM
  • cerebral cortex: 17 nTPM
  • basal ganglia: 7.3 nTPM
  • white matter: 7.1 nTPM
  • amygdala: 6.9 nTPM
  • hippocampal formation: 6.9 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.7
gnomAD pLI
0
gnomAD missense Z
0.08
DepMap mean gene effect
-0.05
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads SLC38A11 as an antibody target. Whether an autoantibody or antibody against SLC38A11 could matter depends on whether native SLC38A11 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

SLC38A11 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label SLC38A11 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/SLC38A11. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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