Seroatlas · Human Serome Atlas

SAA4

Serum amyloid A-4 protein

Also known as: C-SAA, CSAA, SAA4_HUMAN

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
P35542
Gene
SAA4
Ensembl
ENSG00000148965
Chromosome
11
Canonical length
130 aa
Protein class
Plasma proteins, Predicted secreted proteins
Secretome location
Secreted to blood

OverviewNCBI Gene

Predicted to be involved in acute-phase response. Located in extracellular exosome. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

130 residues, UniProt reviewed canonical sequence.

>P35542|SAA4
     1  MRLFTGIVFC SLVMGVTSES WRSFFKEALQ GVGDMGRAYW DIMISNHQNS NRYLYARGNY
    61  DAAQRGPGGV WAAKLISRSR VYLQGLIDCY LFGNSSTVLE DSKSNEKAEE WGRSGKDPDR
   121  FRPDGLPKKY

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against SAA4 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Secreted
Secreted
Yes
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.35
Highest tissue expression
2,068 nTPM

Expression across tissuesHPA

Tissue

  • liver: 2,068 nTPM
  • cervix: 15 nTPM
  • salivary gland: 12 nTPM
  • adipose tissue: 6.8 nTPM
  • breast: 6.2 nTPM
  • skeletal muscle: 3.3 nTPM

Single-cell type

  • hepatocytes: 1,879 nCPM
  • conjunctival goblet cells: 50 nCPM
  • hepatic stellate cells: 26 nCPM
  • lacrimal acinar cells: 21 nCPM
  • submucosal glandular cells: 14 nCPM
  • salivary ionocytes: 10 nCPM

Immune cell

  • memory B-cell: 0.2 nTPM
  • basophil: 0 nTPM
  • classical monocyte: 0 nTPM
  • eosinophil: 0 nTPM
  • gdT-cell: 0 nTPM
  • intermediate monocyte: 0 nTPM

Brain region

  • white matter: 0.4 nTPM
  • cerebral cortex: 0.3 nTPM
  • medulla oblongata: 0.3 nTPM
  • midbrain: 0.3 nTPM
  • thalamus: 0.3 nTPM
  • hippocampal formation: 0.2 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.69
gnomAD pLI
0.01
gnomAD missense Z
-0.3
DepMap mean gene effect
0.04
DepMap dependency class
none

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads SAA4 as an antibody target. Whether an autoantibody or antibody against SAA4 could matter depends on whether native SAA4 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

SAA4 is annotated as secreted, so native SAA4 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.

Annotation status

The present source text does not explicitly label SAA4 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/SAA4. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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