RMC1
Regulator of MON1-CCZ1 complex
Also known as: C18orf8, HsT2591, MIC1, RMC1_HUMAN, WDR98
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q96DM3
- Gene
- RMC1
- Ensembl
- ENSG00000141452
- Chromosome
- 18
- Canonical length
- 657 aa
- Protein class
- Cancer-related genes, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm
OverviewNCBI Gene
This gene encodes a colon cancer associated protein. [provided by RefSeq, Jan 2013]
Canonical amino-acid sequenceUniProt
657 residues, UniProt reviewed canonical sequence.
>Q96DM3|RMC1
1 MGEEDYYLEL CERPVQFEKA NPVNCVFFDE ANKQVFAVRS GGATGVVVKG PDDRNPISFR
61 MDDKGEVKCI KFSLENKILA VQRTSKTVDF CNFIPDNSQL EYTQECKTKN ANILGFCWTS
121 STEIVFITDQ GIEFYQVLPE KRSLKLLKSH NLNVNWYMYC PESAVILLST TVLENVLQPF
181 HFRAGTMSKL PKFEIELPAA PKSTKPSLSE RDIAMATIYG QLYVLFLRHH SRTSNSTGAE
241 VVLYHLPREG ACKKMHILKL NRTGKFALNV VDNLVVVHHQ DTETSVIFDI KLRGEFDGSV
301 TFHHPVLPAR SIQPYQIPIT GPAAVTSQSP VPCKLYSSSW IVFQPDIIIS ASQGYLWNLQ
361 VKLEPIVNLL PDKGRLMDFL LQRKECKMVI LSVCSQMLSE SDRASLPVIA TVFDKLNHEY
421 KKYLDAEQSY AMAVEAGQSR SSPLLKRPVR TQAVLDQSDV YTHVLSAFVE KKEMPHKFVI
481 AVLMEYIRSL NQFQIAVQHY LHELVIKTLV QHNLFYMLHQ FLQYHVLSDS KPLACLLLSL
541 ESFYPPAHQL SLDMLKRLST ANDEIVEVLL SKHQVLAALR FIRGIGGHDN ISARKFLDAA
601 KQTEDNMLFY TIFRFFEQRN QRLRGSPNFT PGEHCEEHVA FFKQIFGDQA LMRPTTFLocalizationUniProt · AlphaFold · HPA
Whether an antibody against RMC1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.27
- Highest tissue expression
- 26 nTPM
Expression across tissuesHPA
Tissue
- bone marrow: 26 nTPM
- retina: 24 nTPM
- lymph node: 20 nTPM
- liver: 18 nTPM
- tonsil: 18 nTPM
- small intestine: 16 nTPM
Single-cell type
- epididymal basal cells: 181 nCPM
- rod photoreceptor cells: 102 nCPM
- endometrial glandular cells: 101 nCPM
- epididymal clear cells: 94 nCPM
- epicardial cells: 80 nCPM
- cone photoreceptor cells: 77 nCPM
Immune cell
- basophil: 51 nTPM
- non-classical monocyte: 45 nTPM
- plasmacytoid DC: 45 nTPM
- eosinophil: 38 nTPM
- NK-cell: 33 nTPM
- memory B-cell: 33 nTPM
Brain region
- choroid plexus: 15 nTPM
- white matter: 12 nTPM
- cerebral cortex: 11 nTPM
- hypothalamus: 11 nTPM
- pons: 8.7 nTPM
- basal ganglia: 8.3 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.3
- gnomAD pLI
- 0.99
- DepMap mean gene effect
- 0.01
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Cellular components
Protein domainsUniProt · Pfam · InterPro
- WD40/YVTN repeat-like-containing domain superfamily
- WD40-repeat-containing domain superfamily
- Regulator of MON1-CCZ1 complex, C-terminal
- Regulator of MON1-CCZ1 complex
- Regulator of MON1-CCZ1 complex, N-terminal
- Regulator of MON1-CCZ1 complex, C-terminal
- Regulator of MON1-CCZ1 complex, N-terminal
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads RMC1 as an antibody target. Whether an autoantibody or antibody against RMC1 could matter depends on whether native RMC1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
RMC1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label RMC1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...