PID1
PTB-containing, cubilin and LRP1-interacting protein
Also known as: FLJ20701, NYGGF4, PCLI1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q7Z2X4
- Gene
- PID1
- Ensembl
- ENSG00000153823
- Chromosome
- 2
- Canonical length
- 250 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Endoplasmic reticulum
OverviewNCBI Gene
Involved in several processes, including negative regulation of ATP biosynthetic process; negative regulation of D-glucose import; and positive regulation of metabolic process. Located in cytoplasm. [provided by Alliance of Genome Resources, Jul 2025]
Canonical amino-acid sequenceUniProt
250 residues, UniProt reviewed canonical sequence.
>Q7Z2X4|PID1
1 MFSLPLSLPL CEDTAFLPSK CCSSHKTIKQ ARTLIMIFLA SGTHFQTMLK SKLNVLTLKK
61 EPLPAVIFHE PEAIELCTTT PLMKTRTHSG CKVTYLGKVS TTGMQFLSGC TEKPVIELWK
121 KHTLAREDVF PANALLEIRP FQVWLHHLDH KGEATVHMDT FQVARIAYCT ADHNVSPNIF
181 AWVYREINDD LSYQMDCHAV ECESKLEAKK LAHAMMEAFR KTFHSMKSDG RIHSNSSSEE
241 VSQELESDDGLocalizationUniProt · AlphaFold · HPA
Whether an antibody against PID1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.44
- Highest tissue expression
- 91 nTPM
Expression across tissuesHPA
Tissue
- blood vessel: 91 nTPM
- liver: 58 nTPM
- cerebral cortex: 37 nTPM
- colon: 35 nTPM
- urinary bladder: 32 nTPM
- adipose tissue: 29 nTPM
Single-cell type
- fibro-adipogenic progenitors: 1,154 nCPM
- oligodendrocyte progenitor cells: 1,038 nCPM
- cdc: 809 nCPM
- fibroblasts: 698 nCPM
- hepatocytes: 690 nCPM
- leydig cells: 589 nCPM
Immune cell
- myeloid DC: 84 nTPM
- intermediate monocyte: 80 nTPM
- classical monocyte: 71 nTPM
- total PBMC: 28 nTPM
- non-classical monocyte: 17 nTPM
- neutrophil: 1.5 nTPM
Brain region
- midbrain: 67 nTPM
- thalamus: 47 nTPM
- cerebral cortex: 45 nTPM
- basal ganglia: 44 nTPM
- amygdala: 40 nTPM
- hypothalamus: 40 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about PID1.
Disease | GeneticClinVar
1 pathogenic / likely-pathogenic of 41 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.21
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.27
- DepMap mean gene effect
- 0.11
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to cytokine stimulus
- cellular response to fatty acid
- cellular response to interleukin-6
- cellular response to leptin stimulus
- cellular response to tumor necrosis factor
- energy reserve metabolic process
- mitochondrion organization
- negative regulation of ATP biosynthetic process
- negative regulation of D-glucose import
- negative regulation of insulin receptor signaling pathway
- negative regulation of protein localization to plasma membrane
- positive regulation of ATP biosynthetic process
- positive regulation of fat cell proliferation
- positive regulation of gene expression
- positive regulation of reactive oxygen species metabolic process
- positive regulation of transcription by RNA polymerase II
- regulation of mitochondrial fusion
- regulation of mitochondrial membrane potential
- regulation of reactive oxygen species metabolic process
Cellular components
Protein domainsUniProt · Pfam · InterPro
- PTB/PI domain
- PH-like domain superfamily
- Phosphotyrosine interaction domain (PTB/PID)
- Phosphotyrosine interaction domain containing 1
- PID1, PTB domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of PID1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads PID1 as an antibody target. Whether an autoantibody or antibody against PID1 could matter depends on whether native PID1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
PID1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label PID1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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